| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is argH2
Identifier: 77461710
GI number: 77461710
Start: 6156949
End: 6158343
Strand: Direct
Name: argH2
Synonym: Pfl01_5489
Alternate gene names: 77461710
Gene position: 6156949-6158343 (Clockwise)
Preceding gene: 77461702
Following gene: 77461712
Centisome position: 95.63
GC content: 62.94
Gene sequence:
>1395_bases ATGAGCACTGACAAGACCAATCAGTCCTGGGGCGGCCGCTTCAGTGAACCCGTCGACGCCTTCGTCGCCCGCTTCACCGC CTCCGTCACTTTCGACCAGCGCCTGTATCGCCACGACATCATGGGCTCGATCGCCCACGCCACCATGCTGGCCAAGGTCG GCGTGCTGACGGATGCCGAGCGCGACAGCATCATCGATGGCCTGAAGACCATCCAGGGCGAAATCGAGGCCGGCCAGTTT GACTGGCGCGTCGACCTCGAAGACGTGCACATGAACATCGAAGCACGCCTGACCGACCGCATCGGCGTCACCGGCAAGAA GCTGCACACCGGCCGTAGCCGCAACGACCAGGTCGCCACCGACATCCGCCTGTGGCTGCGTGACGAAATCGACCTGATCC TGAGCGAAATCACCCGCCTGCAAAAAGGCCTGCTGGAGCAGGCCGAGCGTGAAGCCGCCAGCATCATGCCGGGCTTTACT CACCTGCAGACCGCTCAGCCGGTGACCTTCGGGCACCACATGCTGGCCTGGTTCGAAATGCTCAGCCGCGACTACGAGCG TCTGGTCGACTGCCGCAAGCGCACCAACCGCATGCCGCTGGGCAGCGCCGCACTGGCCGGCACCACTTACCCGATCGACC GCGAATACACCGCACAACTGCTGGGCTTCGACGCCGTCGGCGGCAACTCGCTGGACAACGTGTCCGACCGTGACTTCGCC ATCGAATTCTGCTCGGCCGCGAGCATCGCGATGATGCACCTGTCGCGCTTCTCCGAAGAGCTGGTGCTGTGGACCAGCGC GCAATTCCAGTTCATCGATCTGCCAGACCGTTTCTGCACCGGCAGCTCGATCATGCCGCAAAAGAAAAACCCCGACGTGC CAGAGCTGGTACGTGGCAAGACCGGCCGTGTGTTCGGCGCCCTGATGGGCCTGTTGACCCTGATGAAAGGCCAGCCACTG GCCTACAACAAGGACAATCAGGAAGACAAGGAACCGTTGTTCGACGCCGCCGATACCCTGCGCGACTCGCTGCGGGCTTT TGCCGACATGATCCCGGCGATCAAGCCAAAGCACGCGATCATGCGTGAAGCGGCACTGCGCGGTTTCTCCACCGCCACCG ACCTGGCCGACTACCTGGTACGCCGTGGCCTGCCGTTCCGTGATTGCCACGAGATCGTCGGTCATGCCGTGAAGTACGGC GTCGACACCGGCAAGGATCTGGCGGAAATGAGCCTGGAAGAACTGCGTCAGTTCAGCGACCAGATCGAGCAGGACGTGTT TGCAGTGCTGACCCTGGAAGGTTCGGTAAATGCCCGTGACCACATCGGCGGCACTGCGCCGGCGCAGGTCAAGGCTGCCG TGGTTCGTGGTCAGGCGTTGATCGCCAGCCGCTAA
Upstream 100 bases:
>100_bases AAAAACGTATCGACCAGTGTCAGCGACAGGATTGGCAACCCTGTTATTATCCGCGCCAGCGTTTCACGCCTTCTTTCTTC AAGCCGATACGAGCGAATTC
Downstream 100 bases:
>100_bases AAGCATCGCGGGCAAGTCGAGTTTTCGACTTGCCCGCGAACTTGCTCAAGGTTTTCTACTTTTTGGCGGCGATCATCGCC AAAAACGCCGGCATCGCCGC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL 2; Arginosuccinase 2
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSTDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAERDSIIDGLKTIQGEIEAGQF DWRVDLEDVHMNIEARLTDRIGVTGKKLHTGRSRNDQVATDIRLWLRDEIDLILSEITRLQKGLLEQAEREAASIMPGFT HLQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRTNRMPLGSAALAGTTYPIDREYTAQLLGFDAVGGNSLDNVSDRDFA IEFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGKTGRVFGALMGLLTLMKGQPL AYNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYG VDTGKDLAEMSLEELRQFSDQIEQDVFAVLTLEGSVNARDHIGGTAPAQVKAAVVRGQALIASR
Sequences:
>Translated_464_residues MSTDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAERDSIIDGLKTIQGEIEAGQF DWRVDLEDVHMNIEARLTDRIGVTGKKLHTGRSRNDQVATDIRLWLRDEIDLILSEITRLQKGLLEQAEREAASIMPGFT HLQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRTNRMPLGSAALAGTTYPIDREYTAQLLGFDAVGGNSLDNVSDRDFA IEFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGKTGRVFGALMGLLTLMKGQPL AYNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYG VDTGKDLAEMSLEELRQFSDQIEQDVFAVLTLEGSVNARDHIGGTAPAQVKAAVVRGQALIASR >Mature_463_residues STDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAERDSIIDGLKTIQGEIEAGQFD WRVDLEDVHMNIEARLTDRIGVTGKKLHTGRSRNDQVATDIRLWLRDEIDLILSEITRLQKGLLEQAEREAASIMPGFTH LQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRTNRMPLGSAALAGTTYPIDREYTAQLLGFDAVGGNSLDNVSDRDFAI EFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGKTGRVFGALMGLLTLMKGQPLA YNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGV DTGKDLAEMSLEELRQFSDQIEQDVFAVLTLEGSVNARDHIGGTAPAQVKAAVVRGQALIASR
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=460, Percent_Identity=43.2608695652174, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI68303542, Length=460, Percent_Identity=43.2608695652174, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI68303547, Length=460, Percent_Identity=40.8695652173913, Blast_Score=341, Evalue=1e-93, Organism=Homo sapiens, GI68303549, Length=460, Percent_Identity=40.4347826086956, Blast_Score=333, Evalue=2e-91, Organism=Escherichia coli, GI1790398, Length=451, Percent_Identity=49.2239467849224, Blast_Score=438, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6321806, Length=452, Percent_Identity=43.5840707964602, Blast_Score=362, Evalue=1e-101, Organism=Drosophila melanogaster, GI221473854, Length=441, Percent_Identity=40.1360544217687, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI78706858, Length=441, Percent_Identity=40.1360544217687, Blast_Score=326, Evalue=2e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY2_PSEPF (Q3K4S8)
Other databases:
- EMBL: CP000094 - RefSeq: YP_351217.1 - ProteinModelPortal: Q3K4S8 - SMR: Q3K4S8 - STRING: Q3K4S8 - GeneID: 3713813 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_5489 - eggNOG: COG0165 - HOGENOM: HBG539632 - OMA: EDIHTVI - ProtClustDB: PRK00855 - BioCyc: PFLU205922:PFL_5489-MONOMER - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 51682; Mature: 51551
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RDSIIDGLKTIQGEIEAGQFDWRVDLEDVHMNIEARLTDRIGVTGKKLHTGRSRNDQVAT HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCEEEEEHHHCCCCCCHHCCCCCCCCHHHH DIRLWLRDEIDLILSEITRLQKGLLEQAEREAASIMPGFTHLQTAQPVTFGHHMLAWFEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHH LSRDYERLVDCRKRTNRMPLGSAALAGTTYPIDREYTAQLLGFDAVGGNSLDNVSDRDFA HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHH IEFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGK HHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHCCC TGRVFGALMGLLTLMKGQPLAYNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAI CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGVDTGKDLAEMSLEELRQFSD HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QIEQDVFAVLTLEGSVNARDHIGGTAPAQVKAAVVRGQALIASR HHHHHEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHCCHHHCCC >Mature Secondary Structure STDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RDSIIDGLKTIQGEIEAGQFDWRVDLEDVHMNIEARLTDRIGVTGKKLHTGRSRNDQVAT HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCEEEEEHHHCCCCCCHHCCCCCCCCHHHH DIRLWLRDEIDLILSEITRLQKGLLEQAEREAASIMPGFTHLQTAQPVTFGHHMLAWFEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHH LSRDYERLVDCRKRTNRMPLGSAALAGTTYPIDREYTAQLLGFDAVGGNSLDNVSDRDFA HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHH IEFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGK HHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHCCC TGRVFGALMGLLTLMKGQPLAYNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAI CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGVDTGKDLAEMSLEELRQFSD HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QIEQDVFAVLTLEGSVNARDHIGGTAPAQVKAAVVRGQALIASR HHHHHEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA