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The map label for this gene is ygfB [C]

Identifier: 77461656

GI number: 77461656

Start: 6103092

End: 6103652

Strand: Reverse

Name: ygfB [C]

Synonym: Pfl01_5435

Alternate gene names: 77461656

Gene position: 6103652-6103092 (Counterclockwise)

Preceding gene: 77461660

Following gene: 77461655

Centisome position: 94.8

GC content: 61.85

Gene sequence:

>561_bases
ATGCCCATTCAGAATTCCCCGTACCAAGGCTTCGCCACCCTGCTAAATTCCAGCGGTCACTCCGTTTCGCCTGCCGAACT
GCACGGCCTGTTGCTCGGTCGCAGTTGTGCCGGCGCCGGCTTCAATGCCGAAGAATGGCTGATCGATGCCGCCGAGCTGC
TTGAAAGCGAGCCGCAGGACAACGTTCGCAACGCGCTGATCGGCCTGCAGGAAATGGTCAAGAGCGAACTCACCGGCGAC
GACGTCACCGTGGTTCTGCTGCTGCCGAACGATGACGCACCTCTGGCCGAGCGCGCCGCCGCGCTGGGCGAATGGTGCCA
GGGCTTCCTCACCGGTTTCGGCCTGAACTGCCGCGACAGCAGCATGCTGAGCACCGAAGCTACCGAAGTGTTGCAGGATT
TGGCAGCGATCTCCCAGGTGCAAGACGCCCTGGAAGAATCCGAAGACGGCGAAAGCGATTACATGGAAGTCATGGAGTAC
CTGCGTGTCGCGCCGCTGCTGTTGTTCTCCGAAACCAAAAAGGCCGACGTGCCGCCAGCGGCCAAGCCGTCGCTGCACTG
A

Upstream 100 bases:

>100_bases
GTTTGGCTGGCGGACAGCCTTTAATGGTCTTGGCGAGTCTGTCGATGTAGGATACAAGGCCTTCATTCTAGACATAGCGC
CGTCTGGCGCCTAGCTGCCC

Downstream 100 bases:

>100_bases
TCGCGTGCCAGGGAAAGCCATCTGCCCATGATCCATATCCCGAAAGCGGAATACGCCCGGCGCCGCAAGGCGCTGATGGC
GCAGATGGAACCCAACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPIQNSPYQGFATLLNSSGHSVSPAELHGLLLGRSCAGAGFNAEEWLIDAAELLESEPQDNVRNALIGLQEMVKSELTGD
DVTVVLLLPNDDAPLAERAAALGEWCQGFLTGFGLNCRDSSMLSTEATEVLQDLAAISQVQDALEESEDGESDYMEVMEY
LRVAPLLLFSETKKADVPPAAKPSLH

Sequences:

>Translated_186_residues
MPIQNSPYQGFATLLNSSGHSVSPAELHGLLLGRSCAGAGFNAEEWLIDAAELLESEPQDNVRNALIGLQEMVKSELTGD
DVTVVLLLPNDDAPLAERAAALGEWCQGFLTGFGLNCRDSSMLSTEATEVLQDLAAISQVQDALEESEDGESDYMEVMEY
LRVAPLLLFSETKKADVPPAAKPSLH
>Mature_185_residues
PIQNSPYQGFATLLNSSGHSVSPAELHGLLLGRSCAGAGFNAEEWLIDAAELLESEPQDNVRNALIGLQEMVKSELTGDD
VTVVLLLPNDDAPLAERAAALGEWCQGFLTGFGLNCRDSSMLSTEATEVLQDLAAISQVQDALEESEDGESDYMEVMEYL
RVAPLLLFSETKKADVPPAAKPSLH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family

Homologues:

Organism=Escherichia coli, GI87082182, Length=195, Percent_Identity=31.7948717948718, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5435_PSEPF (Q3K4Y2)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_351163.1
- ProteinModelPortal:   Q3K4Y2
- SMR:   Q3K4Y2
- STRING:   Q3K4Y2
- GeneID:   3714339
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_5435
- eggNOG:   COG3079
- HOGENOM:   HBG701093
- OMA:   ELMNDGQ
- ProtClustDB:   PRK02166
- BioCyc:   PFLU205922:PFL_5435-MONOMER
- HAMAP:   MF_00346
- InterPro:   IPR011978

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 19963; Mature: 19831

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIQNSPYQGFATLLNSSGHSVSPAELHGLLLGRSCAGAGFNAEEWLIDAAELLESEPQD
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
NVRNALIGLQEMVKSELTGDDVTVVLLLPNDDAPLAERAAALGEWCQGFLTGFGLNCRDS
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
SMLSTEATEVLQDLAAISQVQDALEESEDGESDYMEVMEYLRVAPLLLFSETKKADVPPA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AKPSLH
CCCCCC
>Mature Secondary Structure 
PIQNSPYQGFATLLNSSGHSVSPAELHGLLLGRSCAGAGFNAEEWLIDAAELLESEPQD
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
NVRNALIGLQEMVKSELTGDDVTVVLLLPNDDAPLAERAAALGEWCQGFLTGFGLNCRDS
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
SMLSTEATEVLQDLAAISQVQDALEESEDGESDYMEVMEYLRVAPLLLFSETKKADVPPA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AKPSLH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA