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The map label for this gene is gcvH [H]

Identifier: 77461648

GI number: 77461648

Start: 6094268

End: 6094651

Strand: Reverse

Name: gcvH [H]

Synonym: Pfl01_5427

Alternate gene names: 77461648

Gene position: 6094651-6094268 (Counterclockwise)

Preceding gene: 77461649

Following gene: 77461647

Centisome position: 94.66

GC content: 60.16

Gene sequence:

>384_bases
ATGAGCAACATCCCAGCTGAACTGCGTTTTGCCGAAAGTCATGAATGGGCGCGTCTGGAAGCCGACGGCACCGTCACCGT
GGGCATCAGCGATCATGCCCAGGAAGCGTTGGGTGATGTGGTGTTTGTCGAGCTGGCAGAAGTGGGCAAGGTGTTCGCCG
CCGGTGATACCGCCGGTGTCGTCGAGTCGGTGAAGGCCGCTTCCGACATCTACTCCCCGGTCGGTGGCGAAGTGATCGCC
GTCAACGAAGACCTGGCCGGTTCGCCGGAAGAACTGAACAACGATCCGTACGCCGCATGGATCTTCAAGCTCAAGCCAAG
CGACAAGGCCGAGCTGGACAAGCTGCTCGACGCTGCCGCCTATAAGGCTGCCATCGGCGAATAA

Upstream 100 bases:

>100_bases
GTACGCGTGGTCAAACCGACCTTTGTCCGTCACGGCAAAACCTTGATCTAAACCTTTTCCGGCGGGCACGACCGCTGACA
ATTTCTTGAGGACACCGAGC

Downstream 100 bases:

>100_bases
GCTTCACGCAACACTGCAAAGCCCCGACCCGTCGGGGCTTTTTTCTGCCCGGGACTTTTGCCGTCGGGGTGGCTGCTATG
CTGGTTTGACCGTGTTGCAT

Product: glycine cleavage system protein H

Products: Proton; NADH; NH3; CO2; 5,10-methylene-THF [C]

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSNIPAELRFAESHEWARLEADGTVTVGISDHAQEALGDVVFVELAEVGKVFAAGDTAGVVESVKAASDIYSPVGGEVIA
VNEDLAGSPEELNNDPYAAWIFKLKPSDKAELDKLLDAAAYKAAIGE

Sequences:

>Translated_127_residues
MSNIPAELRFAESHEWARLEADGTVTVGISDHAQEALGDVVFVELAEVGKVFAAGDTAGVVESVKAASDIYSPVGGEVIA
VNEDLAGSPEELNNDPYAAWIFKLKPSDKAELDKLLDAAAYKAAIGE
>Mature_126_residues
SNIPAELRFAESHEWARLEADGTVTVGISDHAQEALGDVVFVELAEVGKVFAAGDTAGVVESVKAASDIYSPVGGEVIAV
NEDLAGSPEELNNDPYAAWIFKLKPSDKAELDKLLDAAAYKAAIGE

Specific function: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein [H]

COG id: COG0509

COG function: function code E; Glycine cleavage system H protein (lipoate-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 lipoyl-binding domain [H]

Homologues:

Organism=Homo sapiens, GI49574537, Length=118, Percent_Identity=48.3050847457627, Blast_Score=106, Evalue=6e-24,
Organism=Homo sapiens, GI89057342, Length=118, Percent_Identity=47.4576271186441, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1789271, Length=126, Percent_Identity=62.6984126984127, Blast_Score=164, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17507493, Length=113, Percent_Identity=46.0176991150442, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17551294, Length=113, Percent_Identity=42.4778761061947, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6319272, Length=102, Percent_Identity=41.1764705882353, Blast_Score=89, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17865652, Length=123, Percent_Identity=42.2764227642276, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003016
- InterPro:   IPR002930
- InterPro:   IPR017453
- InterPro:   IPR011053 [H]

Pfam domain/function: PF01597 GCV_H [H]

EC number: NA

Molecular weight: Translated: 13346; Mature: 13215

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIPAELRFAESHEWARLEADGTVTVGISDHAQEALGDVVFVELAEVGKVFAAGDTAGV
CCCCCCCEEECCCCCEEEEECCCEEEEEECHHHHHHHHHHHHEEHHHHCCEEECCCCHHH
VESVKAASDIYSPVGGEVIAVNEDLAGSPEELNNDPYAAWIFKLKPSDKAELDKLLDAAA
HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHH
YKAAIGE
HHHHCCC
>Mature Secondary Structure 
SNIPAELRFAESHEWARLEADGTVTVGISDHAQEALGDVVFVELAEVGKVFAAGDTAGV
CCCCCCEEECCCCCEEEEECCCEEEEEECHHHHHHHHHHHHEEHHHHCCEEECCCCHHH
VESVKAASDIYSPVGGEVIAVNEDLAGSPEELNNDPYAAWIFKLKPSDKAELDKLLDAAA
HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHH
YKAAIGE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Lipoyl Cofactor. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD; L-glycine; THF [C]

Specific reaction: NAD + L-glycine + THF = Proton + NADH + NH3 + CO2 + 5,10-methylene-THF [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]