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The map label for this gene is 77461630

Identifier: 77461630

GI number: 77461630

Start: 6074519

End: 6075145

Strand: Direct

Name: 77461630

Synonym: Pfl01_5409

Alternate gene names: NA

Gene position: 6074519-6075145 (Clockwise)

Preceding gene: 77461629

Following gene: 77461639

Centisome position: 94.35

GC content: 66.83

Gene sequence:

>627_bases
ATGACGCGTCCCGCCCCCGTCCGCAAACCCCGTGCCCGCAGTCAGGCGCGGATCGATTCGATACTCGACGCCGCGCGCAC
GCTGCTGGCCGCCGAGGGCGTGGCGAGCCTGTCGATCTACAGCGTGGCCGAGCGCGCGCAGATTCCGCCCTCTTCGGTCT
ACCACTTCTTCGCCAGCGTCCCGGCGCTGCTCGAAGCGCTGACCGCAGATGTGCACGCGGCCTTCCGTGCCTGCCTGCAA
GCACCGATCGATCACGATGCCCTGCGCGACTGGCGCGACCTGTCACGGCTGGTCGAAGAGCGGATGCTGGAAATCTACGG
CGAGGATGCCGCCGCTCGCCAGCTCATTCTCGCGCAGCACGGCCTGACCGAAGTCACCCAGGCCGACCGTCAGCACGATC
TTGAGCTGGGCGACCTGATGCACAAGCTGTTCGACCATCACTTCGAACTGCCGCGACTGCCGGATGACGTCGACGTGTTC
GCGCTGGCCATGGAACTGGGCGACCGCGTCTACGCCCGCTCGGTGCAGCAGCACGGCCAGATCACCCCGCGCATGGCCGA
GGAAGGCATGCGGGTGTTCGATGCCTATATCGGGCTGTATCTGCCGCCGTATCTGCCCAAGCGCTGA

Upstream 100 bases:

>100_bases
AAACGCCGTTGGCTTCTCAGCCAGCGGCGTTTTTTTATTGGCCTCTGTGGCAGACATTCAAGCTCTGCGTACAATGCCCG
CTGCCCCGCAGGAGACTTTC

Downstream 100 bases:

>100_bases
GACATGATCGTTCCCACGCTCTGCGTGGGAACGATCAACATCAGCGATCAGCGAACAACAAAAAACCCCGAAGGGCTCAC
ACCCTTCGGGGTTGTTTTTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AguR; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTRPAPVRKPRARSQARIDSILDAARTLLAAEGVASLSIYSVAERAQIPPSSVYHFFASVPALLEALTADVHAAFRACLQ
APIDHDALRDWRDLSRLVEERMLEIYGEDAAARQLILAQHGLTEVTQADRQHDLELGDLMHKLFDHHFELPRLPDDVDVF
ALAMELGDRVYARSVQQHGQITPRMAEEGMRVFDAYIGLYLPPYLPKR

Sequences:

>Translated_208_residues
MTRPAPVRKPRARSQARIDSILDAARTLLAAEGVASLSIYSVAERAQIPPSSVYHFFASVPALLEALTADVHAAFRACLQ
APIDHDALRDWRDLSRLVEERMLEIYGEDAAARQLILAQHGLTEVTQADRQHDLELGDLMHKLFDHHFELPRLPDDVDVF
ALAMELGDRVYARSVQQHGQITPRMAEEGMRVFDAYIGLYLPPYLPKR
>Mature_207_residues
TRPAPVRKPRARSQARIDSILDAARTLLAAEGVASLSIYSVAERAQIPPSSVYHFFASVPALLEALTADVHAAFRACLQA
PIDHDALRDWRDLSRLVEERMLEIYGEDAAARQLILAQHGLTEVTQADRQHDLELGDLMHKLFDHHFELPRLPDDVDVFA
LAMELGDRVYARSVQQHGQITPRMAEEGMRVFDAYIGLYLPPYLPKR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23433; Mature: 23302

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPAPVRKPRARSQARIDSILDAARTLLAAEGVASLSIYSVAERAQIPPSSVYHFFASV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
PALLEALTADVHAAFRACLQAPIDHDALRDWRDLSRLVEERMLEIYGEDAAARQLILAQH
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GLTEVTQADRQHDLELGDLMHKLFDHHFELPRLPDDVDVFALAMELGDRVYARSVQQHGQ
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ITPRMAEEGMRVFDAYIGLYLPPYLPKR
CCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TRPAPVRKPRARSQARIDSILDAARTLLAAEGVASLSIYSVAERAQIPPSSVYHFFASV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
PALLEALTADVHAAFRACLQAPIDHDALRDWRDLSRLVEERMLEIYGEDAAARQLILAQH
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GLTEVTQADRQHDLELGDLMHKLFDHHFELPRLPDDVDVFALAMELGDRVYARSVQQHGQ
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ITPRMAEEGMRVFDAYIGLYLPPYLPKR
CCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA