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The map label for this gene is yjiK [H]

Identifier: 77461604

GI number: 77461604

Start: 6045873

End: 6046790

Strand: Reverse

Name: yjiK [H]

Synonym: Pfl01_5383

Alternate gene names: 77461604

Gene position: 6046790-6045873 (Counterclockwise)

Preceding gene: 77461605

Following gene: 77461602

Centisome position: 93.92

GC content: 58.61

Gene sequence:

>918_bases
ATGCGTCGACTTGCCCGCCCCAAGCCTCTGTTCATCATCCTGTCGATGATTGCCCTGATCGCATTGATTGCGATCGGCCA
ATACATGCGCCTGTTCGAGCGTGCCTGGTTCAACCTGCATACGCTCTGGCAGCCGATGAGCAGCCAGTCCATCGGGCTGG
ATCAATATCGGGCAGAGATTGAAGCGAAAGTCATCGATGGGCTGAACGACGACGTGTCCGCGCTGACCTACGATCCGGTG
CGCAAGAGCCTGTTCACCGTGACCAACAAGAATGCCGAACTGATCGAGCTGTCGCTGGACGGCGCGATCCTGCGTCGGGT
CGCCTTGATCGGCTTCGGTGATCCGGAGGCGGTGGAGTTCATCAGCGCCGACACCTATGTGATCACCGATGAGCGCCAGC
AACGGCTGATCAAGATCCATCTGGAACACGACACCACGTTCCTCGATGCAGCGGACGCCGAGCAAATGACCCTCGGTGTG
CACATGAGCGGCAACAAGGGCTTTGAAGGCCTGGCTTACGACTCGGTGGGCAAGCGCCTGTTCGTGGCCAAGGAGCGGGA
TCCGATGCTGATCTATGAAGTGCACGGTTTTCCGCACTTCAATCCGGAAAAGTCCTACGCGGTACACGTGATCAACAATC
CCAAGCGCGATGCCGGGATGTTCGTGCGCGATCTGTCGAGCCTGCAATACGACGAGCGCAGCGGTCATTTACTGGCGCTG
TCCGACGAGTCACGGCTGATTCTTGAACTGGATGTGGACGGGCGCCCGTTGAGCACCATGTCGTTGAGCGGTGGCCGGCA
GGGCCTGAAGAAAACCGTGCCGCAGGCGGAAGGTATCGCGATGGACGACGACGGGACGTTGTATCTGGTGAGCGAACCGA
ACCTGTTTTATGTCTTCAGGAAGCCTGCGCAGAACTAA

Upstream 100 bases:

>100_bases
GCAGATCTGTGGAGTTGTGGCCTGAGGCAAGTGGCCATTAAGCTTCAGTTCAGACAGGCGTGATATTTCATCCGCCTGTT
TTGACTCCGAGCCTGCCTGA

Downstream 100 bases:

>100_bases
CCAGCACCATCTAACAATGTGGGAGCTAGCAAACTGGCTCCCACAGTTTTTTCATCTGCCCACCAAAATACGGGCAGTTT
CGGCTTACTCAGCCTTCAGT

Product: SdiA-regulated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRRLARPKPLFIILSMIALIALIAIGQYMRLFERAWFNLHTLWQPMSSQSIGLDQYRAEIEAKVIDGLNDDVSALTYDPV
RKSLFTVTNKNAELIELSLDGAILRRVALIGFGDPEAVEFISADTYVITDERQQRLIKIHLEHDTTFLDAADAEQMTLGV
HMSGNKGFEGLAYDSVGKRLFVAKERDPMLIYEVHGFPHFNPEKSYAVHVINNPKRDAGMFVRDLSSLQYDERSGHLLAL
SDESRLILELDVDGRPLSTMSLSGGRQGLKKTVPQAEGIAMDDDGTLYLVSEPNLFYVFRKPAQN

Sequences:

>Translated_305_residues
MRRLARPKPLFIILSMIALIALIAIGQYMRLFERAWFNLHTLWQPMSSQSIGLDQYRAEIEAKVIDGLNDDVSALTYDPV
RKSLFTVTNKNAELIELSLDGAILRRVALIGFGDPEAVEFISADTYVITDERQQRLIKIHLEHDTTFLDAADAEQMTLGV
HMSGNKGFEGLAYDSVGKRLFVAKERDPMLIYEVHGFPHFNPEKSYAVHVINNPKRDAGMFVRDLSSLQYDERSGHLLAL
SDESRLILELDVDGRPLSTMSLSGGRQGLKKTVPQAEGIAMDDDGTLYLVSEPNLFYVFRKPAQN
>Mature_305_residues
MRRLARPKPLFIILSMIALIALIAIGQYMRLFERAWFNLHTLWQPMSSQSIGLDQYRAEIEAKVIDGLNDDVSALTYDPV
RKSLFTVTNKNAELIELSLDGAILRRVALIGFGDPEAVEFISADTYVITDERQQRLIKIHLEHDTTFLDAADAEQMTLGV
HMSGNKGFEGLAYDSVGKRLFVAKERDPMLIYEVHGFPHFNPEKSYAVHVINNPKRDAGMFVRDLSSLQYDERSGHLLAL
SDESRLILELDVDGRPLSTMSLSGGRQGLKKTVPQAEGIAMDDDGTLYLVSEPNLFYVFRKPAQN

Specific function: Unknown

COG id: COG3204

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yjiK family [H]

Homologues:

Organism=Escherichia coli, GI145693216, Length=254, Percent_Identity=31.8897637795276, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR009722 [H]

Pfam domain/function: PF06977 SdiA-regulated [H]

EC number: NA

Molecular weight: Translated: 34345; Mature: 34345

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLARPKPLFIILSMIALIALIAIGQYMRLFERAWFNLHTLWQPMSSQSIGLDQYRAEI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
EAKVIDGLNDDVSALTYDPVRKSLFTVTNKNAELIELSLDGAILRRVALIGFGDPEAVEF
HHHEECCCCCCHHHEEHHHHHHHEEEEECCCCEEEEEECCHHHHHHHHEEECCCHHHEEE
ISADTYVITDERQQRLIKIHLEHDTTFLDAADAEQMTLGVHMSGNKGFEGLAYDSVGKRL
EECCEEEEECCCCCEEEEEEEECCCEEEECCCCCEEEEEEEECCCCCCCCCEECCCCCEE
FVAKERDPMLIYEVHGFPHFNPEKSYAVHVINNPKRDAGMFVRDLSSLQYDERSGHLLAL
EEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEE
SDESRLILELDVDGRPLSTMSLSGGRQGLKKTVPQAEGIAMDDDGTLYLVSEPNLFYVFR
CCCCEEEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCEEECCCCEEEEEECCCEEEEEE
KPAQN
CCCCC
>Mature Secondary Structure
MRRLARPKPLFIILSMIALIALIAIGQYMRLFERAWFNLHTLWQPMSSQSIGLDQYRAEI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
EAKVIDGLNDDVSALTYDPVRKSLFTVTNKNAELIELSLDGAILRRVALIGFGDPEAVEF
HHHEECCCCCCHHHEEHHHHHHHEEEEECCCCEEEEEECCHHHHHHHHEEECCCHHHEEE
ISADTYVITDERQQRLIKIHLEHDTTFLDAADAEQMTLGVHMSGNKGFEGLAYDSVGKRL
EECCEEEEECCCCCEEEEEEEECCCEEEECCCCCEEEEEEEECCCCCCCCCEECCCCCEE
FVAKERDPMLIYEVHGFPHFNPEKSYAVHVINNPKRDAGMFVRDLSSLQYDERSGHLLAL
EEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEE
SDESRLILELDVDGRPLSTMSLSGGRQGLKKTVPQAEGIAMDDDGTLYLVSEPNLFYVFR
CCCCEEEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCEEECCCCEEEEEECCCEEEEEE
KPAQN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]