| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ilvA [H]
Identifier: 77461602
GI number: 77461602
Start: 6043453
End: 6044967
Strand: Reverse
Name: ilvA [H]
Synonym: Pfl01_5381
Alternate gene names: 77461602
Gene position: 6044967-6043453 (Counterclockwise)
Preceding gene: 77461604
Following gene: 77461601
Centisome position: 93.89
GC content: 63.63
Gene sequence:
>1515_bases ATGCTCGAACAGTACGTCAAGAAGATCCTCACCTCGCGCGTTTATGACGTTGCCGTAGAAACCCCGCTGCAGAACGCCCG CCAGCTCTCCGAGCGGCTGGGCAACGACATCTGGCTCAAGCGCGAAGACTTGCAGCCGGTGTTCTCGTTCAAGATTCGCG GTGCCTACAACAAGCTGACCCAGTTGAGCGACGAAGAGCGCGCTCGCGGCGTGGTCACCGCGTCGGCGGGCAACCATGCA CAGGGCCTGGCCCTGGCGGCGAAAGTGTTGGGCGTGAAAGCGACCATCGTGATGCCCAAGACCACCCCGGAGATCAAGGT CGAAGGCGTGCGCTCGCGCGGTGGCAAAGTGGTGCTGCACGGCGATTCCTTCCCGGAAGCGCTGGCCTACTCGCTGAAGC TGGTCGACGAAAAAGGCTACGTCTACATCCACCCGTACGACGATCCGCACACCATTGCCGGGCAGGGCACCGTGGCGATG GAAATTCTGCGCCAGCACCCGCAGCCGCTGGATGCGATTTTCGTTCCGGTGGGCGGCGGCGGTCTGATCGCCGGCATCGC GGCCTACGTGAAATACCTGCGTCCGGACATCAAGGTCATCGGCGTCGAGCCCGACGACTCCAACTGCCTGCAAGCGGCGA TGGCGGCAGGCGAACGCGTGGTGCTGCCGACTGTAGGCATCTTCGCCGACGGCGTGGCGGTGGCGCAGATCGGCCAGCAC ACCTTCGATATCTGCAAGGATTACGTCGACGAGGTGATCACCGTCAGCACCGACGAGATTTGCGCGGCGATCAAGGACAT CTACGACGACACCCGTTCGATCACCGAACCGGCCGGCGCCCTGGGCGTGGCCGGGATCAAGAAGTATGTCGAGCAGCGCG GCGTCAGCGGCCAGACCTTCGTCGCCATCGACTCCGGGGCCAACGTCAACTTCGACCGCTTGCGCCACGTCGCCGAGCGC GCCGAACTGGGTGAAGGCCGCGAAGCGATCATCGCCGTGACCATCCCGGAGAAGGCCGGCAGCTTCAAGGCCTTCTGCGA GGCCATCGGCAAGCGCCAGATCACCGAATTCAACTACCGCTATAACAATGGCAGCGAAGCGCACATCTTCGTCGGCGTGC AGACCCACCCGGACAACGACCCGCGCAGTGCTTTGCTGGCGAGCCTGACCGAACAGGGTTTCCCGGTGCTCGACCTGACC GACAACGAACTGGCCAAACTGCACATCCGCCACATGGTCGGCGGTCGCGCCGCGCACGTGGTCGATGAAGTGGTGCTGCG CTTCGAGTTCCCGGAGCGTCCGGGCGCGCTGTTCAACTTCCTCAACAAGCTCGGCGGGCGCTGGAACATCTCGATGTTCC ACTACCGCAACCACGGTGCAGCGGACGGTCGTGTGGTGGCGGGTCTGCAAGTGCCCCACGACGAGCGTCATCTGGTGCCC GCAGCCCTTGAGGAAATCGGCTACCCATACTGGGACGAAAGCGACAACCCGGCCTATCAGCTGTTTCTTGGCTGA
Upstream 100 bases:
>100_bases TAGCCTCAAGCCGGGCTAAAACCTCTGGATTCGTGTGGTCGTCCGGCCGAAACCCGGGTTAGACTCGCTGGTCCCGCCCA ACCGCCAGTGATGCTTTCCG
Downstream 100 bases:
>100_bases ACGGCTACGCTGATGGGTATGGCCCAAGGAAAGAGAAATTCATGGAAACCCTGACCACCCTGAAAGTCCTTCACGTCGCG GCGACCGTGGTGATACTGGC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MLEQYVKKILTSRVYDVAVETPLQNARQLSERLGNDIWLKREDLQPVFSFKIRGAYNKLTQLSDEERARGVVTASAGNHA QGLALAAKVLGVKATIVMPKTTPEIKVEGVRSRGGKVVLHGDSFPEALAYSLKLVDEKGYVYIHPYDDPHTIAGQGTVAM EILRQHPQPLDAIFVPVGGGGLIAGIAAYVKYLRPDIKVIGVEPDDSNCLQAAMAAGERVVLPTVGIFADGVAVAQIGQH TFDICKDYVDEVITVSTDEICAAIKDIYDDTRSITEPAGALGVAGIKKYVEQRGVSGQTFVAIDSGANVNFDRLRHVAER AELGEGREAIIAVTIPEKAGSFKAFCEAIGKRQITEFNYRYNNGSEAHIFVGVQTHPDNDPRSALLASLTEQGFPVLDLT DNELAKLHIRHMVGGRAAHVVDEVVLRFEFPERPGALFNFLNKLGGRWNISMFHYRNHGAADGRVVAGLQVPHDERHLVP AALEEIGYPYWDESDNPAYQLFLG
Sequences:
>Translated_504_residues MLEQYVKKILTSRVYDVAVETPLQNARQLSERLGNDIWLKREDLQPVFSFKIRGAYNKLTQLSDEERARGVVTASAGNHA QGLALAAKVLGVKATIVMPKTTPEIKVEGVRSRGGKVVLHGDSFPEALAYSLKLVDEKGYVYIHPYDDPHTIAGQGTVAM EILRQHPQPLDAIFVPVGGGGLIAGIAAYVKYLRPDIKVIGVEPDDSNCLQAAMAAGERVVLPTVGIFADGVAVAQIGQH TFDICKDYVDEVITVSTDEICAAIKDIYDDTRSITEPAGALGVAGIKKYVEQRGVSGQTFVAIDSGANVNFDRLRHVAER AELGEGREAIIAVTIPEKAGSFKAFCEAIGKRQITEFNYRYNNGSEAHIFVGVQTHPDNDPRSALLASLTEQGFPVLDLT DNELAKLHIRHMVGGRAAHVVDEVVLRFEFPERPGALFNFLNKLGGRWNISMFHYRNHGAADGRVVAGLQVPHDERHLVP AALEEIGYPYWDESDNPAYQLFLG >Mature_504_residues MLEQYVKKILTSRVYDVAVETPLQNARQLSERLGNDIWLKREDLQPVFSFKIRGAYNKLTQLSDEERARGVVTASAGNHA QGLALAAKVLGVKATIVMPKTTPEIKVEGVRSRGGKVVLHGDSFPEALAYSLKLVDEKGYVYIHPYDDPHTIAGQGTVAM EILRQHPQPLDAIFVPVGGGGLIAGIAAYVKYLRPDIKVIGVEPDDSNCLQAAMAAGERVVLPTVGIFADGVAVAQIGQH TFDICKDYVDEVITVSTDEICAAIKDIYDDTRSITEPAGALGVAGIKKYVEQRGVSGQTFVAIDSGANVNFDRLRHVAER AELGEGREAIIAVTIPEKAGSFKAFCEAIGKRQITEFNYRYNNGSEAHIFVGVQTHPDNDPRSALLASLTEQGFPVLDLT DNELAKLHIRHMVGGRAAHVVDEVVLRFEFPERPGALFNFLNKLGGRWNISMFHYRNHGAADGRVVAGLQVPHDERHLVP AALEEIGYPYWDESDNPAYQLFLG
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=307, Percent_Identity=34.8534201954397, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI33469958, Length=312, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI19923959, Length=321, Percent_Identity=28.0373831775701, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI295821202, Length=204, Percent_Identity=29.9019607843137, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI295821200, Length=204, Percent_Identity=29.9019607843137, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI4557415, Length=204, Percent_Identity=29.9019607843137, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1790207, Length=500, Percent_Identity=52.6, Blast_Score=520, Evalue=1e-149, Organism=Escherichia coli, GI1789505, Length=312, Percent_Identity=39.4230769230769, Blast_Score=198, Evalue=6e-52, Organism=Caenorhabditis elegans, GI71991565, Length=332, Percent_Identity=35.8433734939759, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17508781, Length=270, Percent_Identity=35.9259259259259, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17537387, Length=343, Percent_Identity=34.6938775510204, Blast_Score=154, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6320930, Length=513, Percent_Identity=51.4619883040936, Blast_Score=483, Evalue=1e-137, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=38.6138613861386, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319788, Length=260, Percent_Identity=26.1538461538462, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI21355833, Length=318, Percent_Identity=34.2767295597484, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24645328, Length=250, Percent_Identity=32.4, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24643623, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI20129101, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55132; Mature: 55132
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQYVKKILTSRVYDVAVETPLQNARQLSERLGNDIWLKREDLQPVFSFKIRGAYNKLT CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHCCCCEEEEEECCHHHHHH QLSDEERARGVVTASAGNHAQGLALAAKVLGVKATIVMPKTTPEIKVEGVRSRGGKVVLH HCCCHHHHCEEEEECCCCCCHHHHHHHHHHCEEEEEEECCCCCCEEEEEEECCCCEEEEE GDSFPEALAYSLKLVDEKGYVYIHPYDDPHTIAGQGTVAMEILRQHPQPLDAIFVPVGGG CCCCHHHHHHHHEEEECCCEEEEECCCCCCEECCCCHHHHHHHHHCCCCCCEEEEEECCC GLIAGIAAYVKYLRPDIKVIGVEPDDSNCLQAAMAAGERVVLPTVGIFADGVAVAQIGQH HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHH TFDICKDYVDEVITVSTDEICAAIKDIYDDTRSITEPAGALGVAGIKKYVEQRGVSGQTF HHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEE VAIDSGANVNFDRLRHVAERAELGEGREAIIAVTIPEKAGSFKAFCEAIGKRQITEFNYR EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEEE YNNGSEAHIFVGVQTHPDNDPRSALLASLTEQGFPVLDLTDNELAKLHIRHMVGGRAAHV ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCHHHHH VDEVVLRFEFPERPGALFNFLNKLGGRWNISMFHYRNHGAADGRVVAGLQVPHDERHLVP HHHHHHEEECCCCCCHHHHHHHHHCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCH AALEEIGYPYWDESDNPAYQLFLG HHHHHCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MLEQYVKKILTSRVYDVAVETPLQNARQLSERLGNDIWLKREDLQPVFSFKIRGAYNKLT CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHCCCCEEEEEECCHHHHHH QLSDEERARGVVTASAGNHAQGLALAAKVLGVKATIVMPKTTPEIKVEGVRSRGGKVVLH HCCCHHHHCEEEEECCCCCCHHHHHHHHHHCEEEEEEECCCCCCEEEEEEECCCCEEEEE GDSFPEALAYSLKLVDEKGYVYIHPYDDPHTIAGQGTVAMEILRQHPQPLDAIFVPVGGG CCCCHHHHHHHHEEEECCCEEEEECCCCCCEECCCCHHHHHHHHHCCCCCCEEEEEECCC GLIAGIAAYVKYLRPDIKVIGVEPDDSNCLQAAMAAGERVVLPTVGIFADGVAVAQIGQH HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHH TFDICKDYVDEVITVSTDEICAAIKDIYDDTRSITEPAGALGVAGIKKYVEQRGVSGQTF HHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEE VAIDSGANVNFDRLRHVAERAELGEGREAIIAVTIPEKAGSFKAFCEAIGKRQITEFNYR EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEEE YNNGSEAHIFVGVQTHPDNDPRSALLASLTEQGFPVLDLTDNELAKLHIRHMVGGRAAHV ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCHHHHH VDEVVLRFEFPERPGALFNFLNKLGGRWNISMFHYRNHGAADGRVVAGLQVPHDERHLVP HHHHHHEEECCCCCCHHHHHHHHHCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCH AALEEIGYPYWDESDNPAYQLFLG HHHHHCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA