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The map label for this gene is ywdK [H]

Identifier: 77461553

GI number: 77461553

Start: 5992040

End: 5992420

Strand: Reverse

Name: ywdK [H]

Synonym: Pfl01_5332

Alternate gene names: 77461553

Gene position: 5992420-5992040 (Counterclockwise)

Preceding gene: 77461555

Following gene: 77461552

Centisome position: 93.07

GC content: 63.78

Gene sequence:

>381_bases
ATGCTGCGTAGCTTTCTGATGCTGGCCGCCTTCTTTGGTTTCACCGGTGTCGGCCTCGGCGCATTCGCCGCCCATGGCCT
GAAAAACCGGTTGACACCCGAATACCTGGCGATCTTCCACACCGGCGTCACTTATCAACTGGTGCACGCACTGGCGCTGT
TCGGCGTGGCGCTGCTGGCCACGCAGCTTCAGGGGCGTCTGGTCGCCTGGGCCGGCATCTCGTTCACCATCGGCATCCTG
CTGTTCTCCGGCAGCCTGTACCTGTTGACCACCCTAGGCATCGGCAAGCTCGGCATCATCACCCCGTTCGGTGGCCTGGC
GTTCCTGATTGGCTGGCTGTGCCTCGGACTCGCCGCCTGGCGCCTGCAGCCAACCGCTTGA

Upstream 100 bases:

>100_bases
AAACGACGGAGAAATAAACGCAGCATAGAGATGGCTTGGCCGAACCGGTTGAGCGGGCCATTATACAGACCCTGCCGATC
GAGTCTGACTGGAGTTCTAC

Downstream 100 bases:

>100_bases
CGCTTGGTGCTGACCTTTAGGTCATGATCGGGCTAGAATGCCACCCCCTAAAAAGTGATGGCGGCGTTGCGCATGCGCAT
TCAGTTGAACGGTGAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLRSFLMLAAFFGFTGVGLGAFAAHGLKNRLTPEYLAIFHTGVTYQLVHALALFGVALLATQLQGRLVAWAGISFTIGIL
LFSGSLYLLTTLGIGKLGIITPFGGLAFLIGWLCLGLAAWRLQPTA

Sequences:

>Translated_126_residues
MLRSFLMLAAFFGFTGVGLGAFAAHGLKNRLTPEYLAIFHTGVTYQLVHALALFGVALLATQLQGRLVAWAGISFTIGIL
LFSGSLYLLTTLGIGKLGIITPFGGLAFLIGWLCLGLAAWRLQPTA
>Mature_126_residues
MLRSFLMLAAFFGFTGVGLGAFAAHGLKNRLTPEYLAIFHTGVTYQLVHALALFGVALLATQLQGRLVAWAGISFTIGIL
LFSGSLYLLTTLGIGKLGIITPFGGLAFLIGWLCLGLAAWRLQPTA

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=121, Percent_Identity=36.3636363636364, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13370; Mature: 13370

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSFLMLAAFFGFTGVGLGAFAAHGLKNRLTPEYLAIFHTGVTYQLVHALALFGVALLA
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TQLQGRLVAWAGISFTIGILLFSGSLYLLTTLGIGKLGIITPFGGLAFLIGWLCLGLAAW
HHHHCCEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
RLQPTA
HCCCCC
>Mature Secondary Structure
MLRSFLMLAAFFGFTGVGLGAFAAHGLKNRLTPEYLAIFHTGVTYQLVHALALFGVALLA
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TQLQGRLVAWAGISFTIGILLFSGSLYLLTTLGIGKLGIITPFGGLAFLIGWLCLGLAAW
HHHHCCEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
RLQPTA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]