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The map label for this gene is mdcC

Identifier: 77461521

GI number: 77461521

Start: 5961359

End: 5961658

Strand: Reverse

Name: mdcC

Synonym: Pfl01_5300

Alternate gene names: 77461521

Gene position: 5961658-5961359 (Counterclockwise)

Preceding gene: 77461522

Following gene: 77461520

Centisome position: 92.6

GC content: 64.67

Gene sequence:

>300_bases
ATGGAAACCTTATCCTTTGAATTCCCCGCCGGGCAGCCGCCGCGTGGTCGGGCGCTGGTCGGTTGTGTCGGTTCGGGCGA
TCTGGAAGTGCTGATCGAACCAGGCCTGGCCGGTAGGCTGACGATCAACGTGCAGACCTCGGTCAATGGCGCCGAGCAGC
GCTGGCAGCATCTGTTTGCGCGGATGTTCGACGGCACCACGCCACCGGCGATGGCCATCGATATCCACGACTTCGGCGCG
ACCCCGGGCGTGGTGCGCCTGCGGCTGGAACAAGGCTTCGAGGAGATCGGCCATGACTGA

Upstream 100 bases:

>100_bases
TTGCATTGAATGCCTCGCCCGGTGGCGCCGCCGACTTGCTCGCCGCCAGCCTGCTGCTCGATCGAATCGAGCGCGACGGC
ATCCTTCAGGGAGCGTTTTG

Downstream 100 bases:

>100_bases
CACCTCGGTACTTCTGCACAAACACAGCTTTGTCGAACTCGGCGCCCGGCAGCGGGCGAAAGCCTTGCTCGACGCCGGCA
CCTTTCGCGAACTGCTCGAC

Product: malonate decarboxylase subunit delta

Products: NA

Alternate protein names: Malonate decarboxylase subunit delta

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
METLSFEFPAGQPPRGRALVGCVGSGDLEVLIEPGLAGRLTINVQTSVNGAEQRWQHLFARMFDGTTPPAMAIDIHDFGA
TPGVVRLRLEQGFEEIGHD

Sequences:

>Translated_99_residues
METLSFEFPAGQPPRGRALVGCVGSGDLEVLIEPGLAGRLTINVQTSVNGAEQRWQHLFARMFDGTTPPAMAIDIHDFGA
TPGVVRLRLEQGFEEIGHD
>Mature_99_residues
METLSFEFPAGQPPRGRALVGCVGSGDLEVLIEPGLAGRLTINVQTSVNGAEQRWQHLFARMFDGTTPPAMAIDIHDFGA
TPGVVRLRLEQGFEEIGHD

Specific function: Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mdcC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MDCC_PSEPF (Q3K5B7)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_351028.1
- STRING:   Q3K5B7
- GeneID:   3715196
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_5300
- eggNOG:   NOG39039
- HOGENOM:   HBG509271
- OMA:   METLSFE
- ProtClustDB:   PRK01220
- BioCyc:   PFLU205922:PFL_5300-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00710
- InterPro:   IPR009662
- ProDom:   PD015450
- TIGRFAMs:   TIGR03130

Pfam domain/function: PF06857 MdcD

EC number: NA

Molecular weight: Translated: 10702; Mature: 10702

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLSFEFPAGQPPRGRALVGCVGSGDLEVLIEPGLAGRLTINVQTSVNGAEQRWQHLFA
CCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHH
RMFDGTTPPAMAIDIHDFGATPGVVRLRLEQGFEEIGHD
HHHCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHCCC
>Mature Secondary Structure
METLSFEFPAGQPPRGRALVGCVGSGDLEVLIEPGLAGRLTINVQTSVNGAEQRWQHLFA
CCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHH
RMFDGTTPPAMAIDIHDFGATPGVVRLRLEQGFEEIGHD
HHHCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA