| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461516
Identifier: 77461516
GI number: 77461516
Start: 5957721
End: 5958137
Strand: Reverse
Name: 77461516
Synonym: Pfl01_5295
Alternate gene names: NA
Gene position: 5958137-5957721 (Counterclockwise)
Preceding gene: 77461517
Following gene: 77461515
Centisome position: 92.54
GC content: 62.83
Gene sequence:
>417_bases ATGATTATTTACGGTGTGGCGCTGCTGGCGATCTGTACGCTGGCAGGGGTGATCATGGGTGACATGCTCGGTGTACTTCT GGGCGTCAAATCCAACGTCGGCGGGGTCGGCATCGCCATGATCCTGTTGATCTGCGCACGGTTGTGGATGCAGAAGCGCG GCGGCATGACCAAGGATTGCGAGATGGGCGTCGGCTTCTGGGGCGCCATGTACATTCCGGTGGTGGTGGCGATGGCCGCG CAACAAAACGTCGTCACCGCCCTGCACGGTGGCCCGGTGGCGGTGCTGGCGGCGATCGGTTCGGTGGTGGTCTGTGGCTG CACGATTGCCCTGATCAGCCGTACCCACAAGGGCGAACCGTTGCCCGACGAGCCGACGGAAATCTCTCCGGTCGGCACAC CTGTAGGAGGTCGCTGA
Upstream 100 bases:
>100_bases GCGCTGTTGCGTGAAGAGGAGGGCCGACGACCCTAGACCACCGACTCAGGCTTCGAACAACAAAAACAACATTCGACGAT GCACTTTGAGGACTACAACA
Downstream 100 bases:
>100_bases TATGTGGGATCTCATTGAAAAAGGTCTGGAACACAACGGTCTGATCACCGCGTTCGCGTTCGTCGGCGTGATCATGTGGG TTTCGGTGATTCTCTCCAAA
Product: malonate transporter MadL subunit
Products: NA
Alternate protein names: Malonate Transporter Subunit MadL; Malonate Transporter; Malonate Carrier Protein; Malonate Transporter L Subunit; Malonate/Sodium Symporter MadL Subunit; MalonateSodium Symporter Subunit MadL; Malonate Transporter Subunit
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MIIYGVALLAICTLAGVIMGDMLGVLLGVKSNVGGVGIAMILLICARLWMQKRGGMTKDCEMGVGFWGAMYIPVVVAMAA QQNVVTALHGGPVAVLAAIGSVVVCGCTIALISRTHKGEPLPDEPTEISPVGTPVGGR
Sequences:
>Translated_138_residues MIIYGVALLAICTLAGVIMGDMLGVLLGVKSNVGGVGIAMILLICARLWMQKRGGMTKDCEMGVGFWGAMYIPVVVAMAA QQNVVTALHGGPVAVLAAIGSVVVCGCTIALISRTHKGEPLPDEPTEISPVGTPVGGR >Mature_138_residues MIIYGVALLAICTLAGVIMGDMLGVLLGVKSNVGGVGIAMILLICARLWMQKRGGMTKDCEMGVGFWGAMYIPVVVAMAA QQNVVTALHGGPVAVLAAIGSVVVCGCTIALISRTHKGEPLPDEPTEISPVGTPVGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14088; Mature: 14088
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYGVALLAICTLAGVIMGDMLGVLLGVKSNVGGVGIAMILLICARLWMQKRGGMTKDC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EMGVGFWGAMYIPVVVAMAAQQNVVTALHGGPVAVLAAIGSVVVCGCTIALISRTHKGEP HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LPDEPTEISPVGTPVGGR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIIYGVALLAICTLAGVIMGDMLGVLLGVKSNVGGVGIAMILLICARLWMQKRGGMTKDC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EMGVGFWGAMYIPVVVAMAAQQNVVTALHGGPVAVLAAIGSVVVCGCTIALISRTHKGEP HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LPDEPTEISPVGTPVGGR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA