| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fliY [C]
Identifier: 77461503
GI number: 77461503
Start: 5943355
End: 5944167
Strand: Direct
Name: fliY [C]
Synonym: Pfl01_5282
Alternate gene names: 77461503
Gene position: 5943355-5944167 (Clockwise)
Preceding gene: 77461502
Following gene: 77461504
Centisome position: 92.31
GC content: 62.24
Gene sequence:
>813_bases ATGCCTTTGATCACGCAGTTATTCGCCGTGCTGGTTTTTGCTTGCCTGAGCTTTGCCGCTCGGGGCGAGAAGCTGCGTAT CGTCACCGAGCCGTGGGCGCCGTACGTCTATGAACAAGACGGCAAGAACCTCGGCCTGGACTACGAAACCACCGCCATCG TGTTCAAGCGTTTGGGCATCGAAGTCGAATGGCAGTTTTTGCCATGGAAACGCTGCCTGTCGATGCTCGAAACCGGTCAG GCCGACGGCGCGCTGGACATCTTCCACAGCGACGAACGCGACGCCACCCTGCTCTATCCGAGCGAACCGCTGTCGGACGT CGAGTTCGTGCTGTTCTACGCCAACGAGCGACCACACCCTTTTAGAAGCCTGCAAGACCTCAAAGGCCTGACCGTCGGCA CCTCGCCGGGCTATCTGTACAGCCCCGACTTTCGCGAATCGACCCTGTTCACTCGGGAACCGGCCCCGACCCACGAAGCC AATTTCGGCAAACTGGTGCGCGGGCGCATCGACCTGCTGATCACCGATCGCCGCGTGGGTCAGCATTTGCTCGATGAACT GGGCATTCGCGACAAGATTACTGAGAACCCGACCGTCATCAGCCGCCAGAGCCAGTTTCTGGCCGTGCGGCGCAACGCCG GGATGGATTTGCTGGTGCAGCGCTTCGGTGCCGAACTGAAGCGTTTCAAGCGCGAACCGGCCTATGCCGAGCTCAGCGCC CGCTACGGCGCGGCCCCCGCCCTGACGGCGCCGCTGGGCAACGCCACCGCCAGCGGCAAAACCGTTGAGCAGCAGGAAAG CGGCGCGCAGTGA
Upstream 100 bases:
>100_bases CAGCGCTTTCGCCGCTGCGATCTTTTGCTTTTAACGCCCGAAACAGAGCTTCTGCGGCCAGTTTCTGGCTCTTTCCGGTT TCTCGTCGTAATCTCAAGCC
Downstream 100 bases:
>100_bases TTGCTCTGTTATACTCCGGCGTTCCCGCCAGGCTCACGCCCGGACGCCCGGAACCGTAACAGGCCTCCCGACCCGCTACA GCGCAGCTTTTCAGCCCGCG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Amino Acid ABC Transporter; ABC-Type Amino Acid Transport/Signal Transduction System
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPLITQLFAVLVFACLSFAARGEKLRIVTEPWAPYVYEQDGKNLGLDYETTAIVFKRLGIEVEWQFLPWKRCLSMLETGQ ADGALDIFHSDERDATLLYPSEPLSDVEFVLFYANERPHPFRSLQDLKGLTVGTSPGYLYSPDFRESTLFTREPAPTHEA NFGKLVRGRIDLLITDRRVGQHLLDELGIRDKITENPTVISRQSQFLAVRRNAGMDLLVQRFGAELKRFKREPAYAELSA RYGAAPALTAPLGNATASGKTVEQQESGAQ
Sequences:
>Translated_270_residues MPLITQLFAVLVFACLSFAARGEKLRIVTEPWAPYVYEQDGKNLGLDYETTAIVFKRLGIEVEWQFLPWKRCLSMLETGQ ADGALDIFHSDERDATLLYPSEPLSDVEFVLFYANERPHPFRSLQDLKGLTVGTSPGYLYSPDFRESTLFTREPAPTHEA NFGKLVRGRIDLLITDRRVGQHLLDELGIRDKITENPTVISRQSQFLAVRRNAGMDLLVQRFGAELKRFKREPAYAELSA RYGAAPALTAPLGNATASGKTVEQQESGAQ >Mature_269_residues PLITQLFAVLVFACLSFAARGEKLRIVTEPWAPYVYEQDGKNLGLDYETTAIVFKRLGIEVEWQFLPWKRCLSMLETGQA DGALDIFHSDERDATLLYPSEPLSDVEFVLFYANERPHPFRSLQDLKGLTVGTSPGYLYSPDFRESTLFTREPAPTHEAN FGKLVRGRIDLLITDRRVGQHLLDELGIRDKITENPTVISRQSQFLAVRRNAGMDLLVQRFGAELKRFKREPAYAELSAR YGAAPALTAPLGNATASGKTVEQQESGAQ
Specific function: Part Of A Binding-Protein-Dependent Transport System For Cystine. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30327; Mature: 30196
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLITQLFAVLVFACLSFAARGEKLRIVTEPWAPYVYEQDGKNLGLDYETTAIVFKRLGI CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHCC EVEWQFLPWKRCLSMLETGQADGALDIFHSDERDATLLYPSEPLSDVEFVLFYANERPHP EEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCH FRSLQDLKGLTVGTSPGYLYSPDFRESTLFTREPAPTHEANFGKLVRGRIDLLITDRRVG HHHHHHHCCCEECCCCCEEECCCCCCCCEEECCCCCCCCCCHHHHHHCEEEEEEECHHHH QHLLDELGIRDKITENPTVISRQSQFLAVRRNAGMDLLVQRFGAELKRFKREPAYAELSA HHHHHHCCCCCCCCCCCCEEECCHHEEEEHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH RYGAAPALTAPLGNATASGKTVEQQESGAQ HCCCCCCEECCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure PLITQLFAVLVFACLSFAARGEKLRIVTEPWAPYVYEQDGKNLGLDYETTAIVFKRLGI CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHCC EVEWQFLPWKRCLSMLETGQADGALDIFHSDERDATLLYPSEPLSDVEFVLFYANERPHP EEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCH FRSLQDLKGLTVGTSPGYLYSPDFRESTLFTREPAPTHEANFGKLVRGRIDLLITDRRVG HHHHHHHCCCEECCCCCEEECCCCCCCCEEECCCCCCCCCCHHHHHHCEEEEEEECHHHH QHLLDELGIRDKITENPTVISRQSQFLAVRRNAGMDLLVQRFGAELKRFKREPAYAELSA HHHHHHCCCCCCCCCCCCEEECCHHEEEEHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH RYGAAPALTAPLGNATASGKTVEQQESGAQ HCCCCCCEECCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA