| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rhlE [H]
Identifier: 77461504
GI number: 77461504
Start: 5944390
End: 5946258
Strand: Direct
Name: rhlE [H]
Synonym: Pfl01_5283
Alternate gene names: 77461504
Gene position: 5944390-5946258 (Clockwise)
Preceding gene: 77461503
Following gene: 77461508
Centisome position: 92.33
GC content: 65.17
Gene sequence:
>1869_bases ATGTCCTTTGCTTCCCTCGGTCTCTCCGAGGCTTTGGTCCGCGCTATCGAAGACGCGGGCTATACCGAGCCTACTCCGGT GCAACAGCGGGCCATTCCCGCCGTGTTGCAAGGTCGCGACCTGATGGTTGCGGCACAGACAGGTACCGGTAAAACCGGCG GTTTCGCCCTTCCGATCCTGGAGCGGCTGTTCCCCAACGGTCACCCGGACAAATCCCAGCGTCACGGCCCGCGCCAACCG CGCGTGCTGGTCTTGACCCCGACCCGCGAACTCGCGGCGCAGGTTCACGACAGTTTCAAGATCTACGCCCGCGACCTGAA ATTCGTCAGCGCGTGCATCTTCGGCGGCGTCGGCATGAATCCGCAGGTTCAGGCCATGTCCCGTGGCGTTGACGTGCTGG TGGCGTGCCCCGGTCGTCTGCTCGACCTGTGCGGCCAGGGCAGTGTCGATCTGTCCCACGTCGAAATTCTCGTGCTCGAC GAAGCCGACCGCATGCTCGACATGGGCTTCGTCCACGACGTGAAGAAAGTCCTCGCCCGTCTGCCGGCCAAGCGCCAGAA CCTGCTGTTCTCGGCGACCTTCTCCAAAGACATCACGGATCTTGCCGGCAAACTGCTGCACAACCCGGAACGCATCGAAG TGACGCCGCCGAACACCACGGTCGAGCGCATCGAACAACGCGTCTTCCGTCTGCCGGCCAGCCACAAGCGTGCACTGCTG GCCCACCTGATCACCGCTGGCGCGTGGGAACAGGTGCTGGTGTTCACCCGCACCAAGCACGGCGCCAACCGTCTGGCCGA GTACCTGGACAAACACGGCCTGCCGGCTGTGGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAAGCCCTGGCCG ACTTCAAGGCCGGTGAAGTGCGCATTCTGGTTGCCACCGACATCGCGGCACGCGGTCTGGACATCGACCAGTTGCCACAC GTGGTCAACTTCGAACTGCCGAACGTCGATGAAGACTACGTCCACCGCATCGGCCGTACCGGCCGGGCCGGTCGTTCGGG CGAGGCGATCTCGCTGGTCGCACCGGACGAAGAAAAACTGCTGAAAAGCATCGAGCGCATGACCAAGCAGAAAATCGCCG ACGGCGACCTGATGGGCTTCGATGCCAGTACCATCGAGGCCGAGAAGCCTGAAGTTCGCGAGCGTCCGGACATGCGCAAC CCGCGCAATGCCCGCGGCCCACGCGGTGACGGCCCGAATGGCGGCGGCGGTGGCGGCGGTCGTAAAGACAAAGGCAAAGA CAAGGGCAAGGAAAAACCGGCCGGCGAACGTGGCGAGCGTCCAGCCCGTCAACAGAAGCCGCGCGAAGGCACCCCGGCCC GCGAACAACGCCAGCCAAGCCAGCCGCCACGCGCCGCTGCTGATCGCGCTCCGGACGAGTTCCTCGACGACGATATCGAT AACTTCGGTAACCGCGTCGACTACGTGCCGAAGCAGGCTCCGACCGGTGGTCGCAACCGTCGTCCAGGCGCTCCGGCGCA AGGCGCAGGTTCAGGCGCACCCCGCGGCGGTCAGTCGCAAGGTCGCCAGAACGGCCCGCGTAACAGCAACGGTTCGAGCA CCGGCACGCCGCCAGGCAAGCGCAGCGGCCCACGCAACGGTGCACCGCGTGACGGCCAGGGTCGTCGCGATGAAAACTCG CGCAACCGCCGCCCGGCCCGTGATGATCAGCAACGCGCTGAACCGGCCGTGCAGAACCCGCGCAGCAGCGGGCCGAAGAT CATGCACAAGGAATCGAAAGCCGACCGCTTCCCGACCCCTGAGCAGCTGGATCAACTGCCAAGCCGCCCACGCGGTGAAA AACCGGCCTTGCTGACCCGCAATCGCTGA
Upstream 100 bases:
>100_bases GGAACCGCAGCAGGACCGGACGGGATTGCGTCCTCTTAAACGCCATTCGCGCCAGGCAAGACTCCCATTGGGCCAAGCCC TAACTAAAACAGGATTACTC
Downstream 100 bases:
>100_bases TTTTTCCACTGCAATGAAAAATGCCCCGGCCTGAAAACCGGGGCATTTTTTGTGCGCCGCTGAAACGAAAGTGGCGGCAG GCAATAAAAAACGCCCCCGG
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MSFASLGLSEALVRAIEDAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGHPDKSQRHGPRQP RVLVLTPTRELAAQVHDSFKIYARDLKFVSACIFGGVGMNPQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLD EADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALL AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEVRILVATDIAARGLDIDQLPH VVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDMRN PRNARGPRGDGPNGGGGGGGRKDKGKDKGKEKPAGERGERPARQQKPREGTPAREQRQPSQPPRAAADRAPDEFLDDDID NFGNRVDYVPKQAPTGGRNRRPGAPAQGAGSGAPRGGQSQGRQNGPRNSNGSSTGTPPGKRSGPRNGAPRDGQGRRDENS RNRRPARDDQQRAEPAVQNPRSSGPKIMHKESKADRFPTPEQLDQLPSRPRGEKPALLTRNR
Sequences:
>Translated_622_residues MSFASLGLSEALVRAIEDAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGHPDKSQRHGPRQP RVLVLTPTRELAAQVHDSFKIYARDLKFVSACIFGGVGMNPQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLD EADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALL AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEVRILVATDIAARGLDIDQLPH VVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDMRN PRNARGPRGDGPNGGGGGGGRKDKGKDKGKEKPAGERGERPARQQKPREGTPAREQRQPSQPPRAAADRAPDEFLDDDID NFGNRVDYVPKQAPTGGRNRRPGAPAQGAGSGAPRGGQSQGRQNGPRNSNGSSTGTPPGKRSGPRNGAPRDGQGRRDENS RNRRPARDDQQRAEPAVQNPRSSGPKIMHKESKADRFPTPEQLDQLPSRPRGEKPALLTRNR >Mature_621_residues SFASLGLSEALVRAIEDAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGHPDKSQRHGPRQPR VLVLTPTRELAAQVHDSFKIYARDLKFVSACIFGGVGMNPQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDE ADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLA HLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEVRILVATDIAARGLDIDQLPHV VNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDMRNP RNARGPRGDGPNGGGGGGGRKDKGKDKGKEKPAGERGERPARQQKPREGTPAREQRQPSQPPRAAADRAPDEFLDDDIDN FGNRVDYVPKQAPTGGRNRRPGAPAQGAGSGAPRGGQSQGRQNGPRNSNGSSTGTPPGKRSGPRNGAPRDGQGRRDENSR NRRPARDDQQRAEPAVQNPRSSGPKIMHKESKADRFPTPEQLDQLPSRPRGEKPALLTRNR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=376, Percent_Identity=42.5531914893617, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=42.1917808219178, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=42.1917808219178, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=42.1917808219178, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI20149629, Length=440, Percent_Identity=36.5909090909091, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI31542656, Length=480, Percent_Identity=36.4583333333333, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=40.4255319148936, Blast_Score=272, Evalue=8e-73, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=40.4255319148936, Blast_Score=272, Evalue=8e-73, Organism=Homo sapiens, GI13518015, Length=366, Percent_Identity=38.7978142076503, Blast_Score=272, Evalue=9e-73, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=39.3854748603352, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=39.3854748603352, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=39.3854748603352, Blast_Score=270, Evalue=4e-72, Organism=Homo sapiens, GI148613856, Length=373, Percent_Identity=37.2654155495979, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI38201710, Length=373, Percent_Identity=37.2654155495979, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI41327773, Length=375, Percent_Identity=35.4666666666667, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI45446747, Length=426, Percent_Identity=34.2723004694836, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI45446743, Length=426, Percent_Identity=34.2723004694836, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI55749865, Length=363, Percent_Identity=38.2920110192837, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI41327771, Length=391, Percent_Identity=34.7826086956522, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI4758138, Length=379, Percent_Identity=36.4116094986807, Blast_Score=249, Evalue=7e-66, Organism=Homo sapiens, GI51094101, Length=357, Percent_Identity=38.655462184874, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI164419743, Length=357, Percent_Identity=38.655462184874, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=39.6694214876033, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI21071032, Length=387, Percent_Identity=37.984496124031, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI188035877, Length=374, Percent_Identity=36.8983957219251, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI41327776, Length=429, Percent_Identity=34.032634032634, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=33.7801608579088, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI38327634, Length=403, Percent_Identity=33.7468982630273, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI50659095, Length=375, Percent_Identity=35.2, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=34.8404255319149, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=33.6065573770492, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI38569505, Length=380, Percent_Identity=33.6842105263158, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=32.9700272479564, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI38569503, Length=380, Percent_Identity=33.6842105263158, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI21040371, Length=369, Percent_Identity=32.520325203252, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI4758112, Length=368, Percent_Identity=31.5217391304348, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI18375623, Length=368, Percent_Identity=31.5217391304348, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.8877005347594, Blast_Score=192, Evalue=9e-49, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=31.1750599520384, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=32.6975476839237, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=31.25, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI4826686, Length=369, Percent_Identity=33.0623306233062, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI41327779, Length=368, Percent_Identity=32.8804347826087, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI9506931, Length=437, Percent_Identity=28.8329519450801, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI8922886, Length=368, Percent_Identity=32.0652173913043, Blast_Score=169, Evalue=8e-42, Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=30.9278350515464, Blast_Score=166, Evalue=8e-41, Organism=Homo sapiens, GI256773275, Length=393, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=31.0810810810811, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI164419732, Length=367, Percent_Identity=29.9727520435967, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=31.2320916905444, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI9966805, Length=341, Percent_Identity=30.4985337243402, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=28.6764705882353, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=29.5264623955432, Blast_Score=136, Evalue=6e-32, Organism=Escherichia coli, GI1787016, Length=389, Percent_Identity=61.439588688946, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=38.9920424403183, Blast_Score=282, Evalue=6e-77, Organism=Escherichia coli, GI1790214, Length=411, Percent_Identity=38.1995133819951, Blast_Score=259, Evalue=4e-70, Organism=Escherichia coli, GI1788930, Length=362, Percent_Identity=41.1602209944751, Blast_Score=251, Evalue=1e-67, Organism=Escherichia coli, GI1787605, Length=375, Percent_Identity=40.2666666666667, Blast_Score=234, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17555296, Length=427, Percent_Identity=36.5339578454333, Blast_Score=269, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17510559, Length=579, Percent_Identity=31.9516407599309, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=41.9178082191781, Blast_Score=261, Evalue=6e-70, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=42.1487603305785, Blast_Score=261, Evalue=7e-70, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=42.1487603305785, Blast_Score=261, Evalue=9e-70, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=42.1487603305785, Blast_Score=261, Evalue=1e-69, Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=35.8638743455497, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI115533224, Length=416, Percent_Identity=37.0192307692308, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI86570094, Length=372, Percent_Identity=37.3655913978495, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=35.656836461126, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=33.0729166666667, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI71995724, Length=373, Percent_Identity=34.3163538873995, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI17507121, Length=373, Percent_Identity=34.0482573726542, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17552642, Length=379, Percent_Identity=35.6200527704486, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17537549, Length=412, Percent_Identity=33.495145631068, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507881, Length=384, Percent_Identity=33.8541666666667, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=34.453781512605, Blast_Score=222, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=34.1333333333333, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=34.453781512605, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=34.0659340659341, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=30.3763440860215, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=32.6315789473684, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI193208216, Length=404, Percent_Identity=30.9405940594059, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=32.6315789473684, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=32.8947368421053, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17505370, Length=371, Percent_Identity=33.1536388140162, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=31.5508021390374, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71982858, Length=369, Percent_Identity=30.3523035230352, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193206561, Length=361, Percent_Identity=30.4709141274238, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=28.3163265306122, Blast_Score=164, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=29.3969849246231, Blast_Score=164, Evalue=2e-40, Organism=Caenorhabditis elegans, GI25148203, Length=440, Percent_Identity=24.7727272727273, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17536103, Length=408, Percent_Identity=28.6764705882353, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI32564046, Length=389, Percent_Identity=29.0488431876607, Blast_Score=152, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17553716, Length=373, Percent_Identity=28.4182305630027, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17536101, Length=408, Percent_Identity=28.6764705882353, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17536099, Length=408, Percent_Identity=28.6764705882353, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=26.775956284153, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=27.8443113772455, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71997889, Length=484, Percent_Identity=26.8595041322314, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25148205, Length=373, Percent_Identity=23.5924932975871, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17557982, Length=389, Percent_Identity=25.4498714652956, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71982862, Length=210, Percent_Identity=29.5238095238095, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=41.6666666666667, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565430, Length=382, Percent_Identity=23.8219895287958, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325138, Length=428, Percent_Identity=40.1869158878505, Blast_Score=293, Evalue=4e-80, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=40.7407407407407, Blast_Score=281, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=39.142091152815, Blast_Score=261, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6324217, Length=378, Percent_Identity=37.3015873015873, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=368, Percent_Identity=40.7608695652174, Blast_Score=253, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=39.2265193370166, Blast_Score=245, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6320173, Length=426, Percent_Identity=32.8638497652582, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=32.8, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=32.258064516129, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6320119, Length=391, Percent_Identity=33.7595907928389, Blast_Score=210, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=373, Percent_Identity=34.5844504021448, Blast_Score=210, Evalue=7e-55, Organism=Saccharomyces cerevisiae, GI6320449, Length=382, Percent_Identity=33.7696335078534, Blast_Score=200, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=386, Percent_Identity=30.0518134715026, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=385, Percent_Identity=30.3896103896104, Blast_Score=189, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=375, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=375, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=420, Percent_Identity=29.2857142857143, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=392, Percent_Identity=33.9285714285714, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=33.6088154269972, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=29.8591549295775, Blast_Score=160, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6321267, Length=370, Percent_Identity=30.2702702702703, Blast_Score=153, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=387, Percent_Identity=28.9405684754522, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=442, Percent_Identity=27.8280542986425, Blast_Score=137, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6323306, Length=324, Percent_Identity=27.4691358024691, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=365, Percent_Identity=24.3835616438356, Blast_Score=117, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=423, Percent_Identity=22.2222222222222, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI17985987, Length=390, Percent_Identity=40.7692307692308, Blast_Score=283, Evalue=3e-76, Organism=Drosophila melanogaster, GI24585582, Length=416, Percent_Identity=37.0192307692308, Blast_Score=281, Evalue=1e-75, Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=37.3961218836565, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24642151, Length=379, Percent_Identity=35.3562005277045, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21356161, Length=367, Percent_Identity=39.2370572207085, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24662330, Length=361, Percent_Identity=37.9501385041551, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI21355075, Length=367, Percent_Identity=37.0572207084469, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=36.2162162162162, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI28574962, Length=358, Percent_Identity=37.1508379888268, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=34.3511450381679, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644479, Length=372, Percent_Identity=34.6774193548387, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI28575014, Length=358, Percent_Identity=36.0335195530726, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644483, Length=372, Percent_Identity=34.6774193548387, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI281361218, Length=372, Percent_Identity=34.6774193548387, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644481, Length=372, Percent_Identity=34.6774193548387, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644487, Length=372, Percent_Identity=34.6774193548387, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI45551833, Length=372, Percent_Identity=34.6774193548387, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644485, Length=372, Percent_Identity=34.6774193548387, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=35.7142857142857, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=33.3333333333333, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI28571808, Length=395, Percent_Identity=34.9367088607595, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI28571809, Length=395, Percent_Identity=34.9367088607595, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI17136814, Length=386, Percent_Identity=36.7875647668394, Blast_Score=216, Evalue=5e-56, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=33.2417582417582, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=33.2417582417582, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24582080, Length=374, Percent_Identity=32.8877005347594, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24582078, Length=374, Percent_Identity=32.8877005347594, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI17136248, Length=374, Percent_Identity=32.8877005347594, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24582075, Length=374, Percent_Identity=32.8877005347594, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=35.6466876971609, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24642822, Length=382, Percent_Identity=32.9842931937173, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24581954, Length=368, Percent_Identity=31.25, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581952, Length=368, Percent_Identity=31.25, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581956, Length=368, Percent_Identity=31.25, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI17647335, Length=367, Percent_Identity=30.2452316076294, Blast_Score=182, Evalue=7e-46, Organism=Drosophila melanogaster, GI21355559, Length=403, Percent_Identity=33.7468982630273, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI20130173, Length=455, Percent_Identity=29.4505494505495, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=3e-44, Organism=Drosophila melanogaster, GI24643725, Length=405, Percent_Identity=27.9012345679012, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24668515, Length=342, Percent_Identity=29.2397660818713, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24640164, Length=388, Percent_Identity=28.0927835051546, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI19920478, Length=349, Percent_Identity=29.7994269340974, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI28571338, Length=230, Percent_Identity=34.7826086956522, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI18859659, Length=230, Percent_Identity=34.7826086956522, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI17136666, Length=416, Percent_Identity=28.8461538461538, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 67688; Mature: 67557
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFASLGLSEALVRAIEDAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKIYARDLKFVSACIFGGVGMN HHHCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR CHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALL CCCHHHCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHH AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEV HHHHHHCCHHHHHEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCE RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL EEEEEECHHHCCCCHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHH LKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDMRNPRNARGPRGDGPNGGGGGGG HHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RKDKGKDKGKEKPAGERGERPARQQKPREGTPAREQRQPSQPPRAAADRAPDEFLDDDID CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHH NFGNRVDYVPKQAPTGGRNRRPGAPAQGAGSGAPRGGQSQGRQNGPRNSNGSSTGTPPGK HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSGPRNGAPRDGQGRRDENSRNRRPARDDQQRAEPAVQNPRSSGPKIMHKESKADRFPTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCEEECCCCCCCCCCH EQLDQLPSRPRGEKPALLTRNR HHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFASLGLSEALVRAIEDAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKIYARDLKFVSACIFGGVGMN HHHCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR CHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALL CCCHHHCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHH AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKAGEV HHHHHHCCHHHHHEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCE RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL EEEEEECHHHCCCCHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHH LKSIERMTKQKIADGDLMGFDASTIEAEKPEVRERPDMRNPRNARGPRGDGPNGGGGGGG HHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RKDKGKDKGKEKPAGERGERPARQQKPREGTPAREQRQPSQPPRAAADRAPDEFLDDDID CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHH NFGNRVDYVPKQAPTGGRNRRPGAPAQGAGSGAPRGGQSQGRQNGPRNSNGSSTGTPPGK HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSGPRNGAPRDGQGRRDENSRNRRPARDDQQRAEPAVQNPRSSGPKIMHKESKADRFPTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCEEECCCCCCCCCCH EQLDQLPSRPRGEKPALLTRNR HHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]