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The map label for this gene is ydhP [H]

Identifier: 77461497

GI number: 77461497

Start: 5936536

End: 5937705

Strand: Direct

Name: ydhP [H]

Synonym: Pfl01_5276

Alternate gene names: 77461497

Gene position: 5936536-5937705 (Clockwise)

Preceding gene: 77461494

Following gene: 77461498

Centisome position: 92.21

GC content: 65.04

Gene sequence:

>1170_bases
ATGCCACTCGCCTTGCTTGCACTCGCTGTTGCCGCTTTCGGCATCGGCACCACTGAATTCGTCATCATGGGCCTGCTGCC
CGATGTCGCTCGCGACCTCGCGGTGAGCATTCCCCATGCGGGCCTGTTGATCACCGGCTACGCCCTGGGCGTGGTGTTCG
GTGCGCCGATCCTCGCGATCGGCACCGCCAACATGCCGCGCAAGGCCACGCTGCTGGGCATGACGCTGATGTTCATTCTC
GGCAACGTGCTGTGCGCGTTGGCGCCTAACTACGCGACACTGATGGCGGCGCGCGTGGTCACCGCGCTGTGCCATGGGGC
GTTCTTCGGCATCGGTTCGGTGGTGGCCGCAGGGCTGGTCGCACCGAACAAACGGGCGCAGGCGATTGCCATGATGTTCA
CCGGCCTGACCCTGGCCAACGTCCTCGGCGTACCGCTGGGCACAGCACTCGGACAGTACGCCGGCTGGCGCTCGACCTTC
TGGGCGGTCTCGGTGATCGGAGTGATCGCGGCCCTCGCCCAATGGCTGTGGTTGCCGAAACACATCCCGATGGACAAGGC
CAACCTCGCCAGCGAATTCAAGGTGCTGGGCAAGGTCAACGTGTTGCTGGCGCTGGGTATGAGCGTGCTCGCGTCCACCA
GCCTGTTCAGTGTGTTCACCTACATCGCGCCGATTCTGCAGGACATCACCGGCGTCAGCCCTCACGGAGTGACCGTGATG
CTACTGTTGTTCGGTGTCGGCCTCACCGGTGGCAGCATGCTCGGCGGACGCCTGGCCGACAGTCGTCTGTTGCCGTCGCT
GGTGGGTGTCGCACTGGCGGTGGTGGTGATTCTGGCGGCGTTCAGCCAGACCAGTCGTTCGGTGGTTCCGGCGGCGATCA
CGCTGGTGCTGTGGGGGATTTTTGCCTTCGCCCTGTGCCCGATCCTGCAACTGCTGATCATCGATCAGGCTCACGAGGCA
CCGAACCTCGGTTCGACCCTGAACCAGAGCGCGTTCAACCTCGGCAATGCCGCCGGCGCCTGGATCGGCGGGCTGGTGGT
GGCCAGTGGCGCGGATCTCGCGGACTTGCCCTGGACCGGCGCGCTGGTGGGCGTGCTGACCGTGCTGACGGCGCTGTTTT
TCATCTACCTGCAACGTCGGGGTGTCGCTGCGGTCAATGTGTCCGGCTGA

Upstream 100 bases:

>100_bases
AATTCCAATAATTCCTGCCTGCCCCGTTCTCGCCCGAGACCGGTCGCCGGCCTGCGTATGCCTGATCAAAGCGTCAAGAC
TACCGACAGAGACCTTGCGC

Downstream 100 bases:

>100_bases
TTCCCGGGGGACACCATTGTGTCCCCACCCGGCGTCAGCCCATCCAACCCTTGCGTCCATGAACGGGCGCGATGTCTTTC
CACCCCCCATCCAAAGGACC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAIGTANMPRKATLLGMTLMFIL
GNVLCALAPNYATLMAARVVTALCHGAFFGIGSVVAAGLVAPNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTF
WAVSVIGVIAALAQWLWLPKHIPMDKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTVM
LLLFGVGLTGGSMLGGRLADSRLLPSLVGVALAVVVILAAFSQTSRSVVPAAITLVLWGIFAFALCPILQLLIIDQAHEA
PNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTGALVGVLTVLTALFFIYLQRRGVAAVNVSG

Sequences:

>Translated_389_residues
MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAIGTANMPRKATLLGMTLMFIL
GNVLCALAPNYATLMAARVVTALCHGAFFGIGSVVAAGLVAPNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTF
WAVSVIGVIAALAQWLWLPKHIPMDKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTVM
LLLFGVGLTGGSMLGGRLADSRLLPSLVGVALAVVVILAAFSQTSRSVVPAAITLVLWGIFAFALCPILQLLIIDQAHEA
PNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTGALVGVLTVLTALFFIYLQRRGVAAVNVSG
>Mature_388_residues
PLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAIGTANMPRKATLLGMTLMFILG
NVLCALAPNYATLMAARVVTALCHGAFFGIGSVVAAGLVAPNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFW
AVSVIGVIAALAQWLWLPKHIPMDKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTVML
LLFGVGLTGGSMLGGRLADSRLLPSLVGVALAVVVILAAFSQTSRSVVPAAITLVLWGIFAFALCPILQLLIIDQAHEAP
NLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTGALVGVLTVLTALFFIYLQRRGVAAVNVSG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=376, Percent_Identity=46.8085106382979, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1786595, Length=356, Percent_Identity=34.8314606741573, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1787808, Length=363, Percent_Identity=29.7520661157025, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693198, Length=335, Percent_Identity=25.3731343283582, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39905; Mature: 39774

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAI
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHEE
GTANMPRKATLLGMTLMFILGNVLCALAPNYATLMAARVVTALCHGAFFGIGSVVAAGLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAALAQWLWLPK
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
HIPMDKANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLLFGVGLTGGSMLGGRLADSRLLPSLVGVALAVVVILAAFSQTSRSVVPAAITLVLWGI
HHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FAFALCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTG
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHH
ALVGVLTVLTALFFIYLQRRGVAAVNVSG
HHHHHHHHHHHHHHHHHHHCCCEEEECCC
>Mature Secondary Structure 
PLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAI
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHEE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HHHHHHHHHHHHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]