| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pgk [H]
Identifier: 77461486
GI number: 77461486
Start: 5924071
End: 5925234
Strand: Reverse
Name: pgk [H]
Synonym: Pfl01_5265
Alternate gene names: 77461486
Gene position: 5925234-5924071 (Counterclockwise)
Preceding gene: 77461487
Following gene: 77461485
Centisome position: 92.03
GC content: 63.32
Gene sequence:
>1164_bases ATGACCGTGTTGAAGATGTCCGACCTCGATCTGCAAGGTAAGCGCGTATTGATCCGCGAAGACCTCAACGTCCCAGTCAA GGACGGTGTTGTCACCAGCGATGCGCGTATCCTGGCTTCGCTGCCGACCATCAAGCTGGCCCTGGAAAAAGGCGCGGCCG TGATGGTCTGCTCGCACCTGGGTCGTCCGACCGAAGGCGAATTCTCTGCCGAGAACAGCCTCAAGCCTGTCGCCGACTAC CTGAGCAAGGCCCTGGGCCGCGAAGTGCCGCTGGTGGCCGACTACCTGGGCGGCGTTGACGTCAAGGCCGGCGACATCGT GCTGTTCGAAAACGTGCGCTTCAATAAGGGCGAGAAAAAGAACGCCGACGAATTGGCCCAGCAATATGCCGCCCTGTGCG ACGTGTTCGTGATGGACGCTTTCGGCACCGCTCACCGTGCTGAAGGTTCGACCCACGGCGTCGCCAAGTTCGCCAAAGTC GCCGCTGCCGGCCCGCTGCTGGCTGCTGAGCTCGACGCACTGGGCAAAGCCCTGGGCGCCCCGGCCAAGCCGATGGCGGC CATCGTTGCCGGCTCCAAGGTCTCGACCAAGCTCGACGTACTGAACAGCCTGAGCCAGATCTGCGATCAACTGATCGTCG GCGGCGGCATCGCCAACACCTTCCTCGCGGCGGCCGGTCACCCGGTCGGCAAGTCGCTGTACGAGCCGGACCTGCTGGAC ACCGCGCGCGCCATCGCCGCCAAGGTCAGCGTGCCGCTGCCGGTCGACGTGGTGGTTGCCAAGGAATTCGCTGAAAGCGC CGAAGCGACCGTGAAACTGATCGCTGACGTCGCTGCCGACGACATGATCCTCGACATCGGCCCGCAAACCGCGGCCAACT TCGCCGAACTGCTGAAGTCGTCGAAAACCATCCTGTGGAACGGCCCGGTCGGCGTGTTCGAATTCGACCAGTTCGGCAAC GGCACCAAAGTGCTGGCCGAAGCCATCGCAGAAAGCGCGGCGTTCTCGATTGCCGGCGGTGGCGACACCCTGGCGGCCAT CGATAAATATGGCGTAGCGGAAAAGATCTCCTACATTTCCACCGGCGGCGGCGCGTTCCTCGAATTCGTCGAAGGCAAGG TGCTGCCGGCCGTTGAAGTCCTGGAAAGCCGGGCCAAGGCCTGA
Upstream 100 bases:
>100_bases CTGGTTCGACAACGAATGGGGTTTTGCCAACCGAATGCTGGATGTTGCAGAACACTATCTGCAAACAGCGACTTCAAAAA AACCGTAGGAAGTGCGACCC
Downstream 100 bases:
>100_bases GGCCGCCCGATTGGCCAGGCAAAGGAGTGTTCAGATGGTCAAGTCGTTAGCGCTGTTGCTGCTGACCGGTACGCTGGCGG CCTGCGGGAGTAACCCGAAG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTVLKMSDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVADY LSKALGREVPLVADYLGGVDVKAGDIVLFENVRFNKGEKKNADELAQQYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKV AAAGPLLAAELDALGKALGAPAKPMAAIVAGSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLD TARAIAAKVSVPLPVDVVVAKEFAESAEATVKLIADVAADDMILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGN GTKVLAEAIAESAAFSIAGGGDTLAAIDKYGVAEKISYISTGGGAFLEFVEGKVLPAVEVLESRAKA
Sequences:
>Translated_387_residues MTVLKMSDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVADY LSKALGREVPLVADYLGGVDVKAGDIVLFENVRFNKGEKKNADELAQQYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKV AAAGPLLAAELDALGKALGAPAKPMAAIVAGSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLD TARAIAAKVSVPLPVDVVVAKEFAESAEATVKLIADVAADDMILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGN GTKVLAEAIAESAAFSIAGGGDTLAAIDKYGVAEKISYISTGGGAFLEFVEGKVLPAVEVLESRAKA >Mature_386_residues TVLKMSDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVADYL SKALGREVPLVADYLGGVDVKAGDIVLFENVRFNKGEKKNADELAQQYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKVA AAGPLLAAELDALGKALGAPAKPMAAIVAGSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLDT ARAIAAKVSVPLPVDVVVAKEFAESAEATVKLIADVAADDMILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNG TKVLAEAIAESAAFSIAGGGDTLAAIDKYGVAEKISYISTGGGAFLEFVEGKVLPAVEVLESRAKA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=412, Percent_Identity=37.8640776699029, Blast_Score=261, Evalue=6e-70, Organism=Homo sapiens, GI31543397, Length=412, Percent_Identity=38.1067961165049, Blast_Score=260, Evalue=2e-69, Organism=Escherichia coli, GI1789294, Length=386, Percent_Identity=70.9844559585492, Blast_Score=548, Evalue=1e-157, Organism=Caenorhabditis elegans, GI17508823, Length=415, Percent_Identity=42.4096385542169, Blast_Score=283, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6319857, Length=416, Percent_Identity=40.8653846153846, Blast_Score=261, Evalue=1e-70, Organism=Drosophila melanogaster, GI17136394, Length=414, Percent_Identity=41.304347826087, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24581203, Length=411, Percent_Identity=38.9294403892944, Blast_Score=246, Evalue=2e-65,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 40092; Mature: 39961
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLKMSDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGAAVMVCSHL CCEEEECCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHHCCHHEEEHHCCCEEEEHHHC GRPTEGEFSAENSLKPVADYLSKALGREVPLVADYLGGVDVKAGDIVLFENVRFNKGEKK CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCC NADELAQQYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKVAAAGPLLAAELDALGKALGA CHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PAKPMAAIVAGSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLD CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHH TARAIAAKVSVPLPVDVVVAKEFAESAEATVKLIADVAADDMILDIGPQTAANFAELLKS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHC SKTILWNGPVGVFEFDQFGNGTKVLAEAIAESAAFSIAGGGDTLAAIDKYGVAEKISYIS CCEEEECCCCCEEEHHCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHCCHHHHHHHHC TGGGAFLEFVEGKVLPAVEVLESRAKA CCCHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure TVLKMSDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGAAVMVCSHL CEEEECCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHHCCHHEEEHHCCCEEEEHHHC GRPTEGEFSAENSLKPVADYLSKALGREVPLVADYLGGVDVKAGDIVLFENVRFNKGEKK CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCC NADELAQQYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKVAAAGPLLAAELDALGKALGA CHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PAKPMAAIVAGSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLD CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHH TARAIAAKVSVPLPVDVVVAKEFAESAEATVKLIADVAADDMILDIGPQTAANFAELLKS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHC SKTILWNGPVGVFEFDQFGNGTKVLAEAIAESAAFSIAGGGDTLAAIDKYGVAEKISYIS CCEEEECCCCCEEEHHCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHCCHHHHHHHHC TGGGAFLEFVEGKVLPAVEVLESRAKA CCCHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA