| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461482
Identifier: 77461482
GI number: 77461482
Start: 5921512
End: 5922123
Strand: Direct
Name: 77461482
Synonym: Pfl01_5261
Alternate gene names: NA
Gene position: 5921512-5922123 (Clockwise)
Preceding gene: 77461481
Following gene: 77461489
Centisome position: 91.97
GC content: 44.77
Gene sequence:
>612_bases ATGCTCAAAACCTTGAAGTTAAGAACCCGGATTAAAGGATCAAATAAACGACAGATACGCGAGGAAAAAAACATGAGCAG GCTACCAATTACTAATGGGGCATATTATACAATTACTACCCAGGATGGTAAGACTTTCTCTGGACCTGTGCGAAGTATGA AAGATGGGAAAATATTAATAGGCATTGCGCTTGAGCCGGATCAGATAAACAATATTGAGCCTATATCAGCACGAATTGGC TTTTTTGCAGCTGTAGGAGAGCTTTTCGCTAGCGGGGCAAGCAGTGCTGCCAGTGCTGTCGGAACCGCCGCAAGCGCGGT CGGAACGATTGCTAGTGGTGCTGGAGAGTTATTTGCCAGCGGGGCAAGCGACCTTGGCAATATAATGCATGTTGATGAAG TTGTTGATCTCTATACCAACGGCTGGAACCTTAACAAAGCATTCCAGCGCTCTAAACATGAAGCGTTTTCTCCTCTTGCA ACCCCTAAACCACCGCAACTCGATTACTATAAATCGCCAAATAAATTATATTTCCACCCGGCCAAATGCGCTTGTCAAAA GTGCGAAAACCGGACAGAAAATGGGCAATTTCTTTATTCACCAGCTCCTTAA
Upstream 100 bases:
>100_bases TCCGGTTGATAAAGATAAAATGAATTTACATGAGGATGATCCACATGCGAATACACCCAGCATATACTTTATGGTGACTG CCAGCACACAAACGTAATAT
Downstream 100 bases:
>100_bases CGTTAATTTCCGCTACACCAGAAAAACATGAAACATGAAACATGAAACAATATTAGTTCAATCATCACAAAAAACCCGCA TCGCTGCGGGTTTTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLKTLKLRTRIKGSNKRQIREEKNMSRLPITNGAYYTITTQDGKTFSGPVRSMKDGKILIGIALEPDQINNIEPISARIG FFAAVGELFASGASSAASAVGTAASAVGTIASGAGELFASGASDLGNIMHVDEVVDLYTNGWNLNKAFQRSKHEAFSPLA TPKPPQLDYYKSPNKLYFHPAKCACQKCENRTENGQFLYSPAP
Sequences:
>Translated_203_residues MLKTLKLRTRIKGSNKRQIREEKNMSRLPITNGAYYTITTQDGKTFSGPVRSMKDGKILIGIALEPDQINNIEPISARIG FFAAVGELFASGASSAASAVGTAASAVGTIASGAGELFASGASDLGNIMHVDEVVDLYTNGWNLNKAFQRSKHEAFSPLA TPKPPQLDYYKSPNKLYFHPAKCACQKCENRTENGQFLYSPAP >Mature_203_residues MLKTLKLRTRIKGSNKRQIREEKNMSRLPITNGAYYTITTQDGKTFSGPVRSMKDGKILIGIALEPDQINNIEPISARIG FFAAVGELFASGASSAASAVGTAASAVGTIASGAGELFASGASDLGNIMHVDEVVDLYTNGWNLNKAFQRSKHEAFSPLA TPKPPQLDYYKSPNKLYFHPAKCACQKCENRTENGQFLYSPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21934; Mature: 21934
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLKLRTRIKGSNKRQIREEKNMSRLPITNGAYYTITTQDGKTFSGPVRSMKDGKILI CCCCEEEHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE GIALEPDQINNIEPISARIGFFAAVGELFASGASSAASAVGTAASAVGTIASGAGELFAS EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHC GASDLGNIMHVDEVVDLYTNGWNLNKAFQRSKHEAFSPLATPKPPQLDYYKSPNKLYFHP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECH AKCACQKCENRTENGQFLYSPAP HHHHHHHHCCCCCCCCEEECCCC >Mature Secondary Structure MLKTLKLRTRIKGSNKRQIREEKNMSRLPITNGAYYTITTQDGKTFSGPVRSMKDGKILI CCCCEEEHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE GIALEPDQINNIEPISARIGFFAAVGELFASGASSAASAVGTAASAVGTIASGAGELFAS EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHC GASDLGNIMHVDEVVDLYTNGWNLNKAFQRSKHEAFSPLATPKPPQLDYYKSPNKLYFHP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECH AKCACQKCENRTENGQFLYSPAP HHHHHHHHCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA