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The map label for this gene is 77461459

Identifier: 77461459

GI number: 77461459

Start: 5894135

End: 5895082

Strand: Direct

Name: 77461459

Synonym: Pfl01_5238

Alternate gene names: NA

Gene position: 5894135-5895082 (Clockwise)

Preceding gene: 77461456

Following gene: 77461460

Centisome position: 91.55

GC content: 59.7

Gene sequence:

>948_bases
ATGAAAGGTTCCCCGTCGTTGTTGTTGGCCGCCATGCTGAGTCTGCCGTTACTGGCTCAAGCCGCAGAACCGGCGCAGTG
CAGTACCGTGAACTTCTCCGATGTCGGCTGGACCGACATCACCGCAACCACCGCCACCACCAGCGTTGTGCTCAACGCCC
TCGGCTACAAGACCAAGACCACCATGATTTCCGTACCCGTGACCTATAAGTCGCTGGCCGACGGCAAGAACATGGACGTG
TTCCTTGGCAACTGGATGCCGACCATGGAAAACGACATCAAGGCCTACCGCGACGCCGGCACCGTGGAAACCGTGCGCAC
CAACCTCAAGGGCGCCAAGTACACCCTCGCCGTTCCGCAGGCCTTGTATGACAAGGGTCTGCACGACTTCGCCGACATCG
CCAAATTCAAGAAAGAACTCGACGGCAAGATCTACGGGATCGAACCGGGCAACGACGGTAACCGCCTGATCCAGAGCATG
ATCGACAAGAACGCCTTTGGCCTGAAAGACGCCGGTTTCAAGGTCGTCGAGTCCAGCGAAGCGGGCATGCTGTCACAGGT
CGACCGCGCGCAGAAACGCGACACCGCCGTGGTGTTCCTCGGCTGGGCGCCGCACCCGATGAACAAGCGCTTCAAGATTC
AGTACCTGACCGGCGGCGATGACTTCTTCGGCCCGGATTTCGGCGCCGCCACCGTGGCGACCAACACCCGCAAGGGCTAC
GCCGAGGAATGCAGCAACGTTGGCCAGCTGCTGAAAAACCTGGAGTTCACCGTCGACATGGAAAGCGAACTGATGGGCAA
CATCCTGGACGACAAGATGAAGCCTGACGCGGCCGCCAAGGCCTGGCTGAAAAAGAATCCACAGGTGCTCGATACCTGGC
TCGCTGGCGTGACCACCATTGACGGTAAACCTGGCCTGGAGGCCGTGAAAGCCAAGATTGCCCAGTAA

Upstream 100 bases:

>100_bases
CGCTGCGGTAGAGCTGTCTCCAGAACGCCATCCAACCGCAACCCATAAGTGCGGTGGTCCAATCGGAACACTGCCAAAAA
AAACACCAAGGAGTCCATTC

Downstream 100 bases:

>100_bases
TCGCTTATGCCGGGCGGGCTAGTCCCGTCCGGGCTGTTTATTTCCTTGCATGCGGACGTTCACTACCATGCTGATTGATC
AGAAAATCCCTTTAGGCCAG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLNALGYKTKTTMISVPVTYKSLADGKNMDV
FLGNWMPTMENDIKAYRDAGTVETVRTNLKGAKYTLAVPQALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSM
IDKNAFGLKDAGFKVVESSEAGMLSQVDRAQKRDTAVVFLGWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGY
AEECSNVGQLLKNLEFTVDMESELMGNILDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTIDGKPGLEAVKAKIAQ

Sequences:

>Translated_315_residues
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLNALGYKTKTTMISVPVTYKSLADGKNMDV
FLGNWMPTMENDIKAYRDAGTVETVRTNLKGAKYTLAVPQALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSM
IDKNAFGLKDAGFKVVESSEAGMLSQVDRAQKRDTAVVFLGWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGY
AEECSNVGQLLKNLEFTVDMESELMGNILDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTIDGKPGLEAVKAKIAQ
>Mature_315_residues
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLNALGYKTKTTMISVPVTYKSLADGKNMDV
FLGNWMPTMENDIKAYRDAGTVETVRTNLKGAKYTLAVPQALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSM
IDKNAFGLKDAGFKVVESSEAGMLSQVDRAQKRDTAVVFLGWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGY
AEECSNVGQLLKNLEFTVDMESELMGNILDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTIDGKPGLEAVKAKIAQ

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34134; Mature: 34134

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLNALGYKTKT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEE
TMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKAYRDAGTVETVRTNLKGAKYTLAVPQ
EEEEECCCHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCH
ALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSE
HHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCC
AGMLSQVDRAQKRDTAVVFLGWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGY
CCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCH
AEECSNVGQLLKNLEFTVDMESELMGNILDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTI
HHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCEEEE
DGKPGLEAVKAKIAQ
CCCCCHHHHHHHHCC
>Mature Secondary Structure
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLNALGYKTKT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEE
TMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKAYRDAGTVETVRTNLKGAKYTLAVPQ
EEEEECCCHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCH
ALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSE
HHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCC
AGMLSQVDRAQKRDTAVVFLGWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGY
CCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCH
AEECSNVGQLLKNLEFTVDMESELMGNILDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTI
HHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCEEEE
DGKPGLEAVKAKIAQ
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]