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The map label for this gene is soxD [H]

Identifier: 77461427

GI number: 77461427

Start: 5855349

End: 5855678

Strand: Reverse

Name: soxD [H]

Synonym: Pfl01_5206

Alternate gene names: 77461427

Gene position: 5855678-5855349 (Counterclockwise)

Preceding gene: 77461428

Following gene: 77461426

Centisome position: 90.95

GC content: 59.39

Gene sequence:

>330_bases
ATGTTGCATATCTTCTGTCCTCACTGCGGCGAACTGCGCTCCGAAGAGGAATTCCACGCATCCGGCCAGGCGCACATTCC
GCGTCCGCTGGATCCGAACAGCTGCACCGACGAGGAGTGGGGCGACTACATGTTCTTTCGCGACAACCCGCGCGGTCTGC
ACCACGAGTTGTGGGATCACGTCGCCGGTTGCCGCCAGTACTTCAACGTCACCCGCGACACCGTGACCTACGAGATTCTC
GAAACCTACAAGATCGGCACCAAGCCGCAATTCACCGACAAGGCTGACACTGCGAAAACAGCCACGACGGCGCTGGGAGA
GAAGGTATGA

Upstream 100 bases:

>100_bases
ACCCGCTGGCCGCACCTTTCTCCATCGACCGTTTCCACAACGGTGCGTTGATCGACGAACACGGCGCTGCGGCTGTCGCC
CACTAACAGGAGAAATCCCC

Downstream 100 bases:

>100_bases
GCCAGACCAATCGCCTGTCCAACGGTGGACGGATCGACCGCAACAAAGTGCTGAGCTTCACCTTCAATGGCCAGACCTAC
AAAGGGTTTGAAGGCGACTC

Product: sarcosine oxidase subunit delta, heterotetrameric

Products: NA

Alternate protein names: Sarcosine oxidase subunit D [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNSCTDEEWGDYMFFRDNPRGLHHELWDHVAGCRQYFNVTRDTVTYEIL
ETYKIGTKPQFTDKADTAKTATTALGEKV

Sequences:

>Translated_109_residues
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNSCTDEEWGDYMFFRDNPRGLHHELWDHVAGCRQYFNVTRDTVTYEIL
ETYKIGTKPQFTDKADTAKTATTALGEKV
>Mature_109_residues
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNSCTDEEWGDYMFFRDNPRGLHHELWDHVAGCRQYFNVTRDTVTYEIL
ETYKIGTKPQFTDKADTAKTATTALGEKV

Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]

COG id: COG4311

COG function: function code E; Sarcosine oxidase delta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006279 [H]

Pfam domain/function: PF04267 SoxD [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 12572; Mature: 12572

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNSCTDEEWGDYMFFRDNPRGLHHELWDH
CEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
VAGCRQYFNVTRDTVTYEILETYKIGTKPQFTDKADTAKTATTALGEKV
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNSCTDEEWGDYMFFRDNPRGLHHELWDH
CEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
VAGCRQYFNVTRDTVTYEILETYKIGTKPQFTDKADTAKTATTALGEKV
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7543100 [H]