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The map label for this gene is soxB [H]

Identifier: 77461428

GI number: 77461428

Start: 5855693

End: 5856943

Strand: Reverse

Name: soxB [H]

Synonym: Pfl01_5207

Alternate gene names: 77461428

Gene position: 5856943-5855693 (Counterclockwise)

Preceding gene: 77461429

Following gene: 77461427

Centisome position: 90.97

GC content: 63.15

Gene sequence:

>1251_bases
ATGCAACGCTATTCGGGCTTCGGCCTCTTCAAACACTCCCTCAGCCACCACGAAAACTGGCAGCGCATGTGGCGCACGCC
GACCCCGAAAAAGGTCTACGACGTGGTCATCGTCGGCGGCGGCGGGCACGGTCTGGCGACGGCTTACTATCTGGCCAAAG
AGCACGGCATCACCAACGTGGCCGTGGTCGAGAAGGGCTGGCTGGGCGGCGGTAACACCGCGCGCAACACCACCATCGTT
CGCTCCAACTACCTGTGGGACGAGTCGGCGCACCTGTACGAACACGCGATGAAACTGTGGGAAGGCCTGTCGCAGGACCT
GAACTACAACGTGATGTTCTCCCAGCGTGGCGTCTACAACCTGTGCCACACCCTGCAGGACATCCGTGATTCCGAGCGTC
GGGTCAGCGCCAACCGCCTCAACGGCGTCGACGGCGAACTGCTCAACGCCAAGCAGGTCGCGGACGAAATTCCGTACCTC
GACTGCTCGAAAAACACCCGCTACCCGGTGATGGGCGCGACCGTTCAGCGTCGCGGCGGCGTGGCCCGTCACGATGCCGT
GGCGTGGGGCTTTGCCCGTGCCGCAGACGCCCTCGGTGTGGACCTGATCCAGCAGACCGAAGTGATCGGTTTCCGCAAGG
AAAACGGTGTGTGCATCGGCGTTGAAACCAACAAGGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAAC
TCCGGGCACATGGCCAAGCTCGCCGGTTTCCGTCTGCCGATCGAATCCCACCCGCTGCAAGCGCTGGTGTCCGAGCCGAT
CAAACCGATCATCGACAGCGTGATCATGTCCAACGCCGTGCACGGTTACATCAGCCAGTCCGACAAGGGCGACCTGGTGA
TCGGCGCCGGTATCGACGGCTACAACGGCTACGGCCAGCGCGGTTCGTACCCGGTGATCGAGCACACCATCCAGGCCATC
GTCGAGATGTTCCCGGTGCTGTCGCGAGTGCGCATGAACCGTCAGTGGGGCGGCATCGTCGACACCACGCCGGACGCCTG
CCCGATCATTTCGAAAACCCCGGTACCGAACATGTTCTTCAACTGCGGTTGGGGCACCGGTGGCTTCAAGGCGACACCTG
GCTCGGGCAACGTGTTTGCCGCAAGCCTGGCCAAGGGTGAAATGCACCCGCTGGCCGCACCTTTCTCCATCGACCGTTTC
CACAACGGTGCGTTGATCGACGAACACGGCGCTGCGGCTGTCGCCCACTAA

Upstream 100 bases:

>100_bases
ACCTCGGCGATGCCGATGTCGAGGCCAACGTCGCCCAGCAGGTTTCGGCCCTGTGCGCTGACTTCCCGGTTTATCGCTGA
GCGTTCTGGAGTACATGACT

Downstream 100 bases:

>100_bases
CAGGAGAAATCCCCATGTTGCATATCTTCTGTCCTCACTGCGGCGAACTGCGCTCCGAAGAGGAATTCCACGCATCCGGC
CAGGCGCACATTCCGCGTCC

Product: sarcosine oxidase subunit beta, heterotetrameric

Products: NA

Alternate protein names: Sarcosine oxidase subunit B [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIV
RSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYNLCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYL
DCSKNTRYPVMGATVQRRGGVARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDGYNGYGQRGSYPVIEHTIQAI
VEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRF
HNGALIDEHGAAAVAH

Sequences:

>Translated_416_residues
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIV
RSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYNLCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYL
DCSKNTRYPVMGATVQRRGGVARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDGYNGYGQRGSYPVIEHTIQAI
VEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRF
HNGALIDEHGAAAVAH
>Mature_416_residues
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIV
RSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYNLCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYL
DCSKNTRYPVMGATVQRRGGVARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDGYNGYGQRGSYPVIEHTIQAI
VEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRF
HNGALIDEHGAAAVAH

Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the soxB family [H]

Homologues:

Organism=Homo sapiens, GI197927446, Length=395, Percent_Identity=22.0253164556962, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI21361378, Length=395, Percent_Identity=22.0253164556962, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006278 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 45254; Mature: 45254

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
AVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYN
EEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
LCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYLDCSKNTRYPVMGATVQRRGG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCCEECCHHHHCCC
VARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCEEEEEEEEEEEECC
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG
CCCEEECCCEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCC
YNGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRFHNGALIDEHGAAAVAH
ECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEECCCCEECCC
>Mature Secondary Structure
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
AVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYN
EEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
LCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYLDCSKNTRYPVMGATVQRRGG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCCEECCHHHHCCC
VARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCEEEEEEEEEEEECC
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG
CCCEEECCCEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCC
YNGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRFHNGALIDEHGAAAVAH
ECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7543100; 1939012; 3202887; 7692961 [H]