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The map label for this gene is rimK [H]

Identifier: 77461418

GI number: 77461418

Start: 5845892

End: 5846395

Strand: Reverse

Name: rimK [H]

Synonym: Pfl01_5197

Alternate gene names: 77461418

Gene position: 5846395-5845892 (Counterclockwise)

Preceding gene: 77461420

Following gene: 77461417

Centisome position: 90.81

GC content: 62.3

Gene sequence:

>504_bases
GTGAAATCCCTCCTTGCACTGCTTTCCCTCGTCGCCCTGCCGGTCCTGGCAGCCGAGCCGACCCTTTACGGACGCTATGA
ATACATCGCACTGCCGGAAATCGGCGGCGAAGTGCTCAAGGCCAAGATGGACACTGGCGCGCTGACCGCCTCGCTGTCGG
CCAAGGACATCGAGACGTTCAAACGCGACGGCGAAGACTGGGTGCGTTTCCGTCTGGCCACCAAGGACGCCAGCAACAAG
GTGTACGAGCACAAGATTGCGCGGATCAGCAAGATCAAGAGTCGCTCGGATGAAGAAGACGAGGGCGAAAGCACCGAAGT
GGCCAAGCGCCCGGTAGTCGATCTGGAACTGTGCCTGGGCGACGTCAAGCGTACCGTGGAGGTCAACCTGACCGACCGCA
GCAACTTCAACTACCCGTTGCTGATCGGTGCCAAGGCCCTGCGCGAGTTCGGCGCGGCGGTGAACCCGGCGCGGCGCTTC
ACGGCGGACAAGCCGGACTGCTAA

Upstream 100 bases:

>100_bases
ATGTTTCACCTGTGGCGCGATAACCTGCCGGGAACGTTCATGCGAACAACGGTCTAAAATCTCGCGTCTGACGCCCCCAT
TTCCCAAGGAAGCCCCTTAC

Downstream 100 bases:

>100_bases
ACCAAGTGGTCTCATTGACGTAACGCCGGGCTTGGGGCACCGTTCGCGCACTTAACCCACAGGCTCGGACGCCATGCCTC
ATATCCTGATTGTCGAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKSLLALLSLVALPVLAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETFKRDGEDWVRFRLATKDASNK
VYEHKIARISKIKSRSDEEDEGESTEVAKRPVVDLELCLGDVKRTVEVNLTDRSNFNYPLLIGAKALREFGAAVNPARRF
TADKPDC

Sequences:

>Translated_167_residues
MKSLLALLSLVALPVLAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETFKRDGEDWVRFRLATKDASNK
VYEHKIARISKIKSRSDEEDEGESTEVAKRPVVDLELCLGDVKRTVEVNLTDRSNFNYPLLIGAKALREFGAAVNPARRF
TADKPDC
>Mature_167_residues
MKSLLALLSLVALPVLAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETFKRDGEDWVRFRLATKDASNK
VYEHKIARISKIKSRSDEEDEGESTEVAKRPVVDLELCLGDVKRTVEVNLTDRSNFNYPLLIGAKALREFGAAVNPARRF
TADKPDC

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 18488; Mature: 18488

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLALLSLVALPVLAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETF
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEECCCHHHHHHH
KRDGEDWVRFRLATKDASNKVYEHKIARISKIKSRSDEEDEGESTEVAKRPVVDLELCLG
HHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHH
DVKRTVEVNLTDRSNFNYPLLIGAKALREFGAAVNPARRFTADKPDC
HHCEEEEEEEECCCCCCCEEEECHHHHHHHCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MKSLLALLSLVALPVLAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETF
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEECCCHHHHHHH
KRDGEDWVRFRLATKDASNKVYEHKIARISKIKSRSDEEDEGESTEVAKRPVVDLELCLG
HHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHH
DVKRTVEVNLTDRSNFNYPLLIGAKALREFGAAVNPARRFTADKPDC
HHCEEEEEEEECCCCCCCEEEECHHHHHHHCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA