| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461406
Identifier: 77461406
GI number: 77461406
Start: 5832142
End: 5834082
Strand: Direct
Name: 77461406
Synonym: Pfl01_5185
Alternate gene names: NA
Gene position: 5832142-5834082 (Clockwise)
Preceding gene: 77461404
Following gene: 77461407
Centisome position: 90.58
GC content: 61.98
Gene sequence:
>1941_bases ATGGTTATGAGTAAAGCGGACGCCTTCACCCAGGCAGGGAAAACCGCGGTGTTGCAGAACATTCAGGGCACTTTGCAATT CCTCCAGCGCTTCCCCCCTTTCAATCAAATGGAACACGCTCACCTGGCCTATCTGGTGGAGCAATGCCAGCTGCGCTTCT ACGGTCAGGGCGAGAGCATCATCAAACCCGCTGACGGGCCGGTCGAACACTTCTACATCGTCAAGCAGGGCCGGGTGGTG GGCGAGCGTCCGCACACGGCCAAGGGCGGCACCGAAACCACGTTTGAAATTACGACCGGCGAGTGTTTTCCCCTTGCCGC GCTGCTTGGCGAACGGGCAACCCGCACCGAGCATCTGGCCGGTGAAGACACCTTCTGTCTGCAACTGAACAAACTGGCGT TCATCAAGCTGTTTGCTCTCTCCAACACCTTCCGCGATTTCGCCCTGCGCGGGGTCAGCAGCCTGCTCGATCAGGTCAAT CAGCAAGTCCAGCAGAAAGCCGTGGAAACCCTCGGCACCCAGTATTCGCTGAACACCCGTCTCGGCGAATTGGCTATGCG CCATCCGGTGACCTGCAGCTCTTCCACCCCACTGCGCGAAGCAGTGAAGCTGATGCACGAACAACAGGTCGGCAGCATCG TCGCGGTGGATGAGCACAAGGCGCCGCTGGGGATTTTCACCCTGCGCGACCTGCGACATGTCGTGGCTGAAGGGGTTGGC GATTTCAGCGAGCCGATCGAGCGACACATGACGCGCTCGCCGTTCTATCTGTCGCCGGATCACAGCGCCTTCGACGCGGC GATTGCCATGACCGAACGGCACATCGCCCATGTCTGTCTGGTCAAGGATCGGCGCCTGTGCGGCGTGGTCTCCGAGCGGG ATCTGTTCTCGCTGCAGCGGGTGGATCTGGTGCACCTGGCGCGGACCATTCGCAGCGCCCAGCGGGTCGAACAACTGGTG ACCCTGCGCGGCGAGATCGGCCAACTGGTGGAGCGCATGCTGGCTCACGGCGCCTCGTCGACCCAGATCACCCACATCAT CACCCTGCTCAACGATCACACCGTGTGCCGGGTGATCGAACTGACCCTCGCCGAAAAAGGCGACCCCGGCGTACCGTTCA GTTGGCTGTGCTTCGGCAGCGAAGGCCGGCGCGAGCAGACGCTGCACACCGATCAGGACAACGGCATTCTGTTCGATGCG CGGGATGCGGCCCATGCGGCGGAGATTCGCGGCAAGCTGCTGCCCATCGCCCAGCAGATCAATACCAGCCTGGCACAATG CGGTTTCACCCTGTGCAAGGGCAACGTCATGGCCGGCAATCCGCAGCTGTGCCTGTCCCGCGCCGAATGGGCCCGTCGCT TTGCCGCGTTCATTCGCGAGGCGACGCCGGAGAACCTGTTGGGCTCCAGCATCTATTTCGACCTGCGCGTGGTCTGGGGT GATGAACAGGGTTGCGAACAATTGCGCCGGGGGATTCTCGATCAGGTCGGCGACAACCGCCTGTTCCAGCGAATGATGGC CGAGAACGCTCTGCGCAACCGCCCGCCAGTGGGACGTTTCCGTGAGTTCGTGCTGACCCGCAAGAACGGCGAGAAAGCCA CCCTGGACCTGAAGATTCAGGGCCTGACCCCGTTTGTCGACGGTGCGCGCCTGCTGGCGCTGGCCCATGGCATCGACGCC AACAACACCCTCGAACGCTTCCGCCAACTGGTGGATAAAGAAGTCATCGACCGGCTGGATGGCGCCGCGTACGAAGAGGC GTACCACTTCATTCAGCAGACGCGCATGCAGCAGCATCAATTGCAGACCCGGGAAAACCTGCCGTATTCGAACCGGGTCG ATCCCGACAGCCTCAATCATCTGGACCGGCGCATCCTGCGTGAATCCCTGCGCCAGGCCCAGCGCCTGCAAAGCAGCCTG ACCCTGCGGTATCAGCTATGA
Upstream 100 bases:
>100_bases GCATGCCCAACCTAGACTTACGTCCAATGGGCACCCCGCGCGATGGGGTCGACCATGGCTGCAACGATCCGACAACAACA ATTCGAAAAAGACTGCGGTA
Downstream 100 bases:
>100_bases GCCTGTTCTCGTGGCTGCGTCCGGCCAGCCCCGTTGTGCCGGACGACCTGCAACAGCGCCTGACGAAACTGCCGGCCATC GGCGAACTGCGCGAGTGCAG
Product: cyclic nucleotide-binding protein (cNMP-bd) protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MVMSKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMEHAHLAYLVEQCQLRFYGQGESIIKPADGPVEHFYIVKQGRVV GERPHTAKGGTETTFEITTGECFPLAALLGERATRTEHLAGEDTFCLQLNKLAFIKLFALSNTFRDFALRGVSSLLDQVN QQVQQKAVETLGTQYSLNTRLGELAMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVG DFSEPIERHMTRSPFYLSPDHSAFDAAIAMTERHIAHVCLVKDRRLCGVVSERDLFSLQRVDLVHLARTIRSAQRVEQLV TLRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLAEKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFDA RDAAHAAEIRGKLLPIAQQINTSLAQCGFTLCKGNVMAGNPQLCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWG DEQGCEQLRRGILDQVGDNRLFQRMMAENALRNRPPVGRFREFVLTRKNGEKATLDLKIQGLTPFVDGARLLALAHGIDA NNTLERFRQLVDKEVIDRLDGAAYEEAYHFIQQTRMQQHQLQTRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSL TLRYQL
Sequences:
>Translated_646_residues MVMSKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMEHAHLAYLVEQCQLRFYGQGESIIKPADGPVEHFYIVKQGRVV GERPHTAKGGTETTFEITTGECFPLAALLGERATRTEHLAGEDTFCLQLNKLAFIKLFALSNTFRDFALRGVSSLLDQVN QQVQQKAVETLGTQYSLNTRLGELAMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVG DFSEPIERHMTRSPFYLSPDHSAFDAAIAMTERHIAHVCLVKDRRLCGVVSERDLFSLQRVDLVHLARTIRSAQRVEQLV TLRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLAEKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFDA RDAAHAAEIRGKLLPIAQQINTSLAQCGFTLCKGNVMAGNPQLCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWG DEQGCEQLRRGILDQVGDNRLFQRMMAENALRNRPPVGRFREFVLTRKNGEKATLDLKIQGLTPFVDGARLLALAHGIDA NNTLERFRQLVDKEVIDRLDGAAYEEAYHFIQQTRMQQHQLQTRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSL TLRYQL >Mature_646_residues MVMSKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMEHAHLAYLVEQCQLRFYGQGESIIKPADGPVEHFYIVKQGRVV GERPHTAKGGTETTFEITTGECFPLAALLGERATRTEHLAGEDTFCLQLNKLAFIKLFALSNTFRDFALRGVSSLLDQVN QQVQQKAVETLGTQYSLNTRLGELAMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVG DFSEPIERHMTRSPFYLSPDHSAFDAAIAMTERHIAHVCLVKDRRLCGVVSERDLFSLQRVDLVHLARTIRSAQRVEQLV TLRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLAEKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFDA RDAAHAAEIRGKLLPIAQQINTSLAQCGFTLCKGNVMAGNPQLCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWG DEQGCEQLRRGILDQVGDNRLFQRMMAENALRNRPPVGRFREFVLTRKNGEKATLDLKIQGLTPFVDGARLLALAHGIDA NNTLERFRQLVDKEVIDRLDGAAYEEAYHFIQQTRMQQHQLQTRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSL TLRYQL
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72801; Mature: 72801
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMEHAHLAYLVEQCQLRFYGQGESI CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCE IKPADGPVEHFYIVKQGRVVGERPHTAKGGTETTFEITTGECFPLAALLGERATRTEHLA ECCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHCC GEDTFCLQLNKLAFIKLFALSNTFRDFALRGVSSLLDQVNQQVQQKAVETLGTQYSLNTR CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHH LGELAMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVG HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC DFSEPIERHMTRSPFYLSPDHSAFDAAIAMTERHIAHVCLVKDRRLCGVVSERDLFSLQR CHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH VDLVHLARTIRSAQRVEQLVTLRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH LTLAEKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFDARDAAHAAEIRGKLLPIAQQI HHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH NTSLAQCGFTLCKGNVMAGNPQLCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWG HHHHHHCCHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEEC DEQGCEQLRRGILDQVGDNRLFQRMMAENALRNRPPVGRFREFVLTRKNGEKATLDLKIQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEE GLTPFVDGARLLALAHGIDANNTLERFRQLVDKEVIDRLDGAAYEEAYHFIQQTRMQQHQ CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LQTRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC >Mature Secondary Structure MVMSKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMEHAHLAYLVEQCQLRFYGQGESI CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCE IKPADGPVEHFYIVKQGRVVGERPHTAKGGTETTFEITTGECFPLAALLGERATRTEHLA ECCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHCC GEDTFCLQLNKLAFIKLFALSNTFRDFALRGVSSLLDQVNQQVQQKAVETLGTQYSLNTR CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHH LGELAMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVG HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC DFSEPIERHMTRSPFYLSPDHSAFDAAIAMTERHIAHVCLVKDRRLCGVVSERDLFSLQR CHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH VDLVHLARTIRSAQRVEQLVTLRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH LTLAEKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFDARDAAHAAEIRGKLLPIAQQI HHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH NTSLAQCGFTLCKGNVMAGNPQLCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWG HHHHHHCCHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEEC DEQGCEQLRRGILDQVGDNRLFQRMMAENALRNRPPVGRFREFVLTRKNGEKATLDLKIQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEE GLTPFVDGARLLALAHGIDANNTLERFRQLVDKEVIDRLDGAAYEEAYHFIQQTRMQQHQ CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LQTRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA