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The map label for this gene is mmgC [H]

Identifier: 77461391

GI number: 77461391

Start: 5815339

End: 5817144

Strand: Reverse

Name: mmgC [H]

Synonym: Pfl01_5170

Alternate gene names: 77461391

Gene position: 5817144-5815339 (Counterclockwise)

Preceding gene: 77461392

Following gene: 77461390

Centisome position: 90.35

GC content: 60.47

Gene sequence:

>1806_bases
ATGCCTGACTACAAGGCCCCCTTGCGTGATATTCGCTTCGTTCGTGACGAACTGCTCGGCTACGAAGCGCACTATCAGAG
CCTTCCAGCGTGCGCAGAAGCAACGCCGGACATGGTTGACGCCATTCTCGAAGAGGGCGCCAAGTTTTGTGAGCAAGTGC
TGGCACCGCTGAACCGCGTGGGTGACACCGAAGGCTGCACCTGGAGCGAGTCCGGCGTGAAAACCCCGACCGGCTTCAAA
GAGGCCTACAAGCAATTCGTCGAAGGCGGCTGGCCAAGTCTGGCCCATGACGTCGAGCACGGCGGTCAGGGGCTGCCTGA
GTCGCTGGGTCTGGCTGTCAGCGAGATGGTCGGCGAAGCCAACTGGTCGTGGGGCATGTACCCGGGTCTGTCGCACGGCG
CGATGAACACCATCTCCGAACACGGCACCCCAGAGCAGCAGGAAGCCTATCTGACCAAACTGGTCTCAGGCGAATGGACC
GGCACCATGTGCCTGACCGAACCGCACTGCGGCACCGACCTGGGCATGCTGCGCACCAAGGCCGAACCTCAGGCCGACGG
TTCCTACAAAGTTTCCGGCACCAAGATCTTCATCTCGGCCGGTGAACACGACATGGCCGACAACATCGTCCACATCGTAC
TGGCCCGCCTGCCGGATGCACCGGCCGGCACCAAAGGCATTTCCCTGTTCATCGTTCCGAAGTTCCTGCCGAACGCCGAC
GGCACCGTCGGTACCCGTAACGCCGTGACCTGCGGTTCGATCGAACACAAGATGGGCATCCACGGCAACGCGACCTGCGT
GATGAACTTCGACGGCGCGACCGGTTTCCTGATCGGCCCGGCGAACAAAGGCCTGAACTGCATGTTCACCTTCATGAACA
CCGCACGTCTGGGTACCGCACTGCAAGGTCTGGCCCACGCCGAAATCGGTTTCCAGGGCGGCCTGAAATACGCTCGCGAT
CGCCTGCAAATGCGTTCCCTGACTGGCCCGAAAGCGCCGGACAAGGCCGCTGACCCGATCATCGTTCACCCAGACGTACG
CCGCATGCTGTTGACCATGAAGGCATTTGCCGAAGGCAACCGTGCGATGGTGTACTTCACCGCCAAACAGGTCGACATCG
TCAAATACGGCGTGGATGAAGAAGAGAAGAAGAAAGCCGACGCACTGCTGGCCTTCATGACTCCGATCGCCAAAGCGTTC
ATGACCGAAGTCGGTTTCGAATCCGCCAACCACGGCGTACAGATCTACGGCGGCCATGGCTTCATCGCCGAGTGGGGCAT
GGAGCAGAACGTTCGCGACAGCCGCATCTCGATGCTGTACGAAGGCACCACCGGCATCCAGGCACTCGACCTGCTGGGCC
GTAAAGTGCTGATGACTCAAGGCGAGGCGCTGAAAGGCTTCACCAAGATCGTCCACAAGTTCTGCCAGAACAACGAAGGC
AACGAAGCCGTCAAGGAATTCGTCGCACCGTTGGCTGCGCTGAACAAAGAGTGGGGCGAGCTGACCATGAAGGTCGGTAT
GGCTGCCATGAAAGATCGCGAAGAAGTCGGCGCGGCCTCGGTGGACTACCTGATGTACTCCGGTTACGCCTGCCTGGCCT
ACTTCTGGGCTGACATGGCGCGTCTGGCTGCCGAAAAACTGGCTGCCGGCACCACCGACGAGGCGTTCTACACCGCCAAG
CTGCAAACCGCGCGCTTCTACTTCCAGCGCATCCTGCCGCGTACCCGCACGCACGTGGCCACCATGTTGTCGGGCGCCAA
CAACCTGATGGACATGAAAGAAGAAGACTTCGCACTGGGCTACTAA

Upstream 100 bases:

>100_bases
AAGATTTCGGCGTAAACGTATGTTTCAAACAACTGTTTGACCGTCACAACAAATCAATGCGGTCGTTCATTCCCGGTTAC
ATCAGCAGAGGTTTATCGCT

Downstream 100 bases:

>100_bases
GCCTTAACGCGGTCTTTCGAAAAACCGCTGCTCCTTCGGGGGCAGCGGTTTTTTTGTGCCCGGATTTCCCCAATTCCGGG
GCTGATTCCCCAGCATTGAT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MPDYKAPLRDIRFVRDELLGYEAHYQSLPACAEATPDMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFK
EAYKQFVEGGWPSLAHDVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWT
GTMCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAD
GTVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARD
RLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAF
MTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEG
NEAVKEFVAPLAALNKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADMARLAAEKLAAGTTDEAFYTAK
LQTARFYFQRILPRTRTHVATMLSGANNLMDMKEEDFALGY

Sequences:

>Translated_601_residues
MPDYKAPLRDIRFVRDELLGYEAHYQSLPACAEATPDMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFK
EAYKQFVEGGWPSLAHDVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWT
GTMCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAD
GTVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARD
RLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAF
MTEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEG
NEAVKEFVAPLAALNKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADMARLAAEKLAAGTTDEAFYTAK
LQTARFYFQRILPRTRTHVATMLSGANNLMDMKEEDFALGY
>Mature_600_residues
PDYKAPLRDIRFVRDELLGYEAHYQSLPACAEATPDMVDAILEEGAKFCEQVLAPLNRVGDTEGCTWSESGVKTPTGFKE
AYKQFVEGGWPSLAHDVEHGGQGLPESLGLAVSEMVGEANWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTG
TMCLTEPHCGTDLGMLRTKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNADG
TVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTALQGLAHAEIGFQGGLKYARDR
LQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFM
TEVGFESANHGVQIYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEGN
EAVKEFVAPLAALNKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADMARLAAEKLAAGTTDEAFYTAKL
QTARFYFQRILPRTRTHVATMLSGANNLMDMKEEDFALGY

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=404, Percent_Identity=24.5049504950495, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4557235, Length=446, Percent_Identity=27.1300448430493, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI76496475, Length=446, Percent_Identity=27.1300448430493, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557233, Length=372, Percent_Identity=27.4193548387097, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI7656849, Length=363, Percent_Identity=27.5482093663912, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI226958412, Length=416, Percent_Identity=26.2019230769231, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI226958414, Length=381, Percent_Identity=25.9842519685039, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI21361497, Length=362, Percent_Identity=25.9668508287293, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4501857, Length=382, Percent_Identity=26.4397905759162, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4557231, Length=328, Percent_Identity=27.1341463414634, Blast_Score=81, Evalue=4e-15,
Organism=Homo sapiens, GI187960098, Length=328, Percent_Identity=27.1341463414634, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI87082384, Length=302, Percent_Identity=28.8079470198675, Blast_Score=107, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=374, Percent_Identity=28.0748663101604, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=339, Percent_Identity=28.6135693215339, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=323, Percent_Identity=28.7925696594427, Blast_Score=100, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=313, Percent_Identity=28.1150159744409, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=422, Percent_Identity=24.8815165876777, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=354, Percent_Identity=26.8361581920904, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI86563383, Length=365, Percent_Identity=23.5616438356164, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=365, Percent_Identity=23.5616438356164, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=420, Percent_Identity=24.5238095238095, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=223, Percent_Identity=33.1838565022422, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=316, Percent_Identity=24.0506329113924, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=235, Percent_Identity=29.3617021276596, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=28.1385281385281, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24666513, Length=369, Percent_Identity=26.8292682926829, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646207, Length=424, Percent_Identity=22.6415094339623, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21356377, Length=384, Percent_Identity=27.6041666666667, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281363737, Length=358, Percent_Identity=25.1396648044693, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=27.9365079365079, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21355753, Length=340, Percent_Identity=25.8823529411765, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 65500; Mature: 65368

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDYKAPLRDIRFVRDELLGYEAHYQSLPACAEATPDMVDAILEEGAKFCEQVLAPLNRV
CCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDTEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAHDVEHGGQGLPESLGLAVSEMVGEA
CCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
NWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTK
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCC
AEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAD
CCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC
GTVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTA
CCCCCCCCEEECCCHHHCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHH
LQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGN
HHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC
RAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEVGFESANHGVQIYGGHG
EEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
FIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEG
CCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCCCC
NEAVKEFVAPLAALNKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
RLAAEKLAAGTTDEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMDMKEEDFALG
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCCCC
Y
C
>Mature Secondary Structure 
PDYKAPLRDIRFVRDELLGYEAHYQSLPACAEATPDMVDAILEEGAKFCEQVLAPLNRV
CCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDTEGCTWSESGVKTPTGFKEAYKQFVEGGWPSLAHDVEHGGQGLPESLGLAVSEMVGEA
CCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
NWSWGMYPGLSHGAMNTISEHGTPEQQEAYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTK
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCC
AEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAD
CCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC
GTVGTRNAVTCGSIEHKMGIHGNATCVMNFDGATGFLIGPANKGLNCMFTFMNTARLGTA
CCCCCCCCEEECCCHHHCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHH
LQGLAHAEIGFQGGLKYARDRLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGN
HHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC
RAMVYFTAKQVDIVKYGVDEEEKKKADALLAFMTPIAKAFMTEVGFESANHGVQIYGGHG
EEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
FIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQNNEG
CCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCCCC
NEAVKEFVAPLAALNKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
RLAAEKLAAGTTDEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMDMKEEDFALG
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]