Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yhjA [C]

Identifier: 77461390

GI number: 77461390

Start: 5812964

End: 5815078

Strand: Reverse

Name: yhjA [C]

Synonym: Pfl01_5169

Alternate gene names: 77461390

Gene position: 5815078-5812964 (Counterclockwise)

Preceding gene: 77461391

Following gene: 77461389

Centisome position: 90.32

GC content: 62.93

Gene sequence:

>2115_bases
ATGAACATCAGTCGACTCGCTCGTTTGACCTTCTGGTTACCCATCGCGCTGTCAGTCCACAGCGCATGGGCCGCCGACCC
CGCCGTGGTCGATCCTCCCGTATCGGAGGTGCCTTCGCTGCAATCGTTGCGCGGGATGGTGCCCCCCGATCCGTCCGGAA
CCGAAGGCGGACGCAAGGTCGACCTGATGACCGACTACGTGCTCAATCGCCAGGCCGCGATCCTGCTGGGCAAAGCGCTG
TTCTGGGACATGGAGATCGGCAGCGACGGCTCCACGGCATGCGCTTCCTGCCACTACCACGCCGGCGTCGACCACCGCAT
CACCAACCAGCTCAACCCCGGCCAGGCCCATACCAACGCCAACGTCGCGTCGATCTTCAACAAACCGTTCGTAGCCTCGG
ACATTCCCGGTGACGTGGCGTCCTACGCGACGCTGTCCGGTGGCAAGGGCGGTCCGAACTACACGCTGAAGAAAACCGAC
TTCCCGACCCACGTGCTGAGCAATCCGCTGGAGCGCAACTCGCCCATCGTGTACTCGACGGACGATGTGGTCGGCTCGCA
AGGCGTGTTCGACGCCAACTTCGTCAAACCCAATCAGGCGCGTTTCGACAAATGTACTCAGCAGCCGGACGGTATTTTCC
AGGTCGGTGGCATCAACGTGCGTCGCAGCACCGGGCGCAATGCGCCGTCGGTGATCAATGCCGCGTTCAACGTGCGCAAC
TTCTGGGACGGTCGGGCCAACAACGTGTTCAACGGCTTCTCGCCGTTCGGTAATCGCGATCCGGATGCCGGGATCTACGT
GACCAGCGAACGCAGCACGGTTGCGACCAAAGTGCGGCTGGCGCTCAACGATGCGTCTGCGGCCTCGCAAGCCGTCGGCC
CGCCCGGCAGCCCGGTGGAAATGTCCTGCGGTGGCCGTACCTTTGCCGACATCGGCCGCAGGATGCTCGACACGCTGATG
CTCAAGCAGCAAAGGATTTCATCCACCGACTCGGTGCTGGCTCCAGTATCGGGCGCACGGCGGCCGACCTATCGCGAACT
GATCAAGAACGCCTTCCAGCCCCGGCTGTGGAACGCCACGCAAAACGTTCTGGTGGGCGGCGTGCCGTACACCCAGATGG
AGGCCAACTTCCCGCTGTTTTTCGGCCTGGCGATCCAGATGTATGAGGCGACGCTGGTGTCCGATCAGGCGCCGATCGAT
GCTTACCTGCAGGGCGATCACACGGCAATGAACGCGCAACAGGTGGAGGGCATGAACCTGTTTCTCGGCAAGGGCAAATG
CGTCAATTGCCACGGCGGTCCGGAGCTGACCAACGCCGCCAGCCGCCTGCTGATGCATCCGCGCGAACGCATCGAGCGCA
TGGTGATGGCCGACAACCTGACCACTCTTTACGACAACGGCTTCTACAACACCGGTGTGCGCCCGACCTCGGAAGACCTG
GCCCTCGGCGGCGCGGATGCCTGGGGCAATCCATGGTCGTTCACCCGGCAGTACAACAGTGTGTTGCAGGGCGGCCGGTC
GGTGGATCCGCTGGACGTCGATGTCTGCACGTTCGAGGCACCGTTGAGTGCGGCGATTCCGTGCGATGCCACGCTCAAAC
CGAATGTCGGTTTCCGCGACTCGGTCGACGGCGCATTCAAGACCCCGACCCTGCGTAACATCGCCCTGACCGGGCCGTAC
TTCCACAACGGCAGCCGCTCGACGCTCAAGCAGGTGATGGAGTTCTACAACCGTGGCGGTGACCGGCGCGGTGAAGATGC
CAACAACACCAGCGGCTTTGAGCATCCGGCGGTGAACCAGCACAACACTTCCAACCTCGACCCGGACATGACGGCGCTGA
ACCTGACGCCCGATGAAATCGACGCGCTGGTGAAATTCATGGAGGTCGGCCTGACCGATCCTCGCGTGGCATGGGAGCGC
GCACCGTTCGATCATCCGTCGCTGGTGATTCCGCAGGGCCACATCGGCGATGAAAATGCCGTGACCCAGCGTCCGGCCAG
TCCGAAAGTCACGACCCGTCAGGCGATGGACGCATCGCTCAATCTCAAGCCTTACGGTGCTGAAGGCCGGCCGGCGGCAG
AGGGGCCATTGCAGCCGTTCTACAACGATCTCTGA

Upstream 100 bases:

>100_bases
CCAATTAATTGCACTGCCCGATTTACCGGTGCTAACCAGAACTGCCTGCTCAAAGAAGCAAGACGCCCGGCACTTAACAA
CAACAGTCAGGGTGAAGCCT

Downstream 100 bases:

>100_bases
GCATAAAAACACACCATGGCCATCAAGAATGATGGCCATGGTGGCCGTCTAGCGGCCATTGCGCAAAAAACCTTACTGAA
TTACTCAGCAACTGCCGATT

Product: hypothetical protein

Products: 2 Ferricytochrome C; 2 H2O. [C]

Alternate protein names: Cytochrome C Peroxidase; Methylamine Utilization Protein/Cytochrome C Peroxidase; Di-Heme Cytochrome-C Peroxidase; Di-Haem Cytochrome C; Cytochrome-C Peroxidase

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKVDLMTDYVLNRQAAILLGKAL
FWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNANVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTD
FPTHVLSNPLERNSPIVYSTDDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN
FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVEMSCGGRTFADIGRRMLDTLM
LKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNATQNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPID
AYLQGDHTAMNAQQVEGMNLFLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL
ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRDSVDGAFKTPTLRNIALTGPY
FHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQHNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWER
APFDHPSLVIPQGHIGDENAVTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL

Sequences:

>Translated_704_residues
MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKVDLMTDYVLNRQAAILLGKAL
FWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNANVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTD
FPTHVLSNPLERNSPIVYSTDDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN
FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVEMSCGGRTFADIGRRMLDTLM
LKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNATQNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPID
AYLQGDHTAMNAQQVEGMNLFLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL
ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRDSVDGAFKTPTLRNIALTGPY
FHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQHNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWER
APFDHPSLVIPQGHIGDENAVTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL
>Mature_704_residues
MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKVDLMTDYVLNRQAAILLGKAL
FWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNANVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTD
FPTHVLSNPLERNSPIVYSTDDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN
FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVEMSCGGRTFADIGRRMLDTLM
LKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNATQNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPID
AYLQGDHTAMNAQQVEGMNLFLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL
ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRDSVDGAFKTPTLRNIALTGPY
FHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQHNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWER
APFDHPSLVIPQGHIGDENAVTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.11.1.5 [C]

Molecular weight: Translated: 76261; Mature: 76261

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCEEE
DLMTDYVLNRQAAILLGKALFWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNA
EEHHHHHHCCCHHHEEHHHHEEEEEECCCCCCHHHCCEECCCCCHHHHCCCCCCCCCCCC
NVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTDFPTHVLSNPLERNSPIVYST
CHHHHHCCCCCCCCCCCHHHHHHEECCCCCCCCCEEECCCCCHHHHCCCHHCCCCEEEEC
DDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHH
FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVE
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCHHHHHCCCCCCCCEE
MSCGGRTFADIGRRMLDTLMLKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNAT
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCC
QNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPIDAYLQGDHTAMNAQQVEGMNL
CCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCCEE
FLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL
EECCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCEECCCCCCCCHHH
ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRD
EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
SVDGAFKTPTLRNIALTGPYFHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQ
CCCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
HNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWERAPFDHPSLVIPQGHIGDENA
CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCC
VTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCEEE
DLMTDYVLNRQAAILLGKALFWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNA
EEHHHHHHCCCHHHEEHHHHEEEEEECCCCCCHHHCCEECCCCCHHHHCCCCCCCCCCCC
NVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTDFPTHVLSNPLERNSPIVYST
CHHHHHCCCCCCCCCCCHHHHHHEECCCCCCCCCEEECCCCCHHHHCCCHHCCCCEEEEC
DDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHH
FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVE
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCHHHHHCCCCCCCCEE
MSCGGRTFADIGRRMLDTLMLKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNAT
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCC
QNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPIDAYLQGDHTAMNAQQVEGMNL
CCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCCEE
FLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL
EECCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCEECCCCCCCCHHH
ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRD
EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
SVDGAFKTPTLRNIALTGPYFHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQ
CCCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
HNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWERAPFDHPSLVIPQGHIGDENA
CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCC
VTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2 Ferrocytochrome C; H2O2 [C]

Specific reaction: 2 Ferrocytochrome C + H2O2 = 2 Ferricytochrome C + 2 H2O. [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA