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The map label for this gene is glxA [H]

Identifier: 77461262

GI number: 77461262

Start: 5678262

End: 5679257

Strand: Reverse

Name: glxA [H]

Synonym: Pfl01_5041

Alternate gene names: 77461262

Gene position: 5679257-5678262 (Counterclockwise)

Preceding gene: 77461270

Following gene: 77461261

Centisome position: 88.21

GC content: 64.86

Gene sequence:

>996_bases
ATGGGTGCAGAAAGGACCGTCGCGGAACTGGGCGTGCTGATGTATCCCGGCGCGCAAATGGCGGCGGTGCATGGCCTGAC
CGACCTGTTCGGGGTCGCCAACCGGATCGCCGCCGAACACCAGGCCACGCAATTGCCGCTGCTACGGATCAGCCACTGGC
AGGTCGATGACGACCACCCGCCCGTGCGGGTTTACGACAGTCATCCCGGAGCCGACAACGGTTTGCTGGCGGTGTTGATC
CCGCCGTCCATTGCCGGTTTTTCCGCGGCACAGATGCCTGCCGGGCTGCTGCCCTGGCTGCGTGAACAACATGCGCGTGG
CGCGACGCTTGGCGGGGTGTGTGTCGGCTCGTGGCTGCTGGCGGAGAGCGGGTTGCTCGACGGTCGTAGCGCTACCACGC
ACTGGACCTCGGCCAAGGCTTTCGCCGAGTGTTACCCGAAGATCAGGCTCAAGGCCGACACGCCGATTGTCGACGACGGT
GACCTGATTACCACGGCGGGGCTGATGGCCTGGTCAGAGCTTGGTTTGCGACTGGTGGACCGATTGCTCGGACCGAGCAT
CGCCAGCAGCACCGCGCGGTTTCTGGTGGTGGAACACAGCGACAGCGCGAGTGCCTGCGGCAGCAATTTCGCCCCGATCC
TCAATCACGGCGACGCGGCGATTCTCAAGGTTCAGCACTGGCTGCAAGGCAACGGCGCGACCGATGTCTCGCTGACGGCG
ATGGCCGAACGTGCGGGCCTCGAAGAACGCACATTCCTGCGCCGTTTCCGCGCGGCGACCGGCCTCAAACCCACCGAATA
CTGCCAGCACCTGCGGGTCGGCAAGGCACGGGAGATGCTGGAGTTCACCAATGGCACCATCGACCACATCGCGTGGACGG
TGGGTTATCAGGATCCGGGAGCCTTTCGCGCAACGTTCAAGAAAATCACCGGGCTGGCGCCGAGTGAATACCGCACGCGA
TTCGGCGTGAGTCCGCCGGCGGCCGTGGCGAAGTAA

Upstream 100 bases:

>100_bases
GGGTGTGTCCTCGAAGTGTGGGTGGGTGTGGGTTCAGTATTGGCGCTGGCCACGGTTTCGAGGATTGGCCGCACCGACAA
TACACAGGGGAAAACTGACA

Downstream 100 bases:

>100_bases
AACCCATCCGTCGTGCAGAATACCGGAGTCATCGAGCCGGTCGTGCAGATTGAAACAGGCGCGGTGCCAGCACGGTTTTT
TCAAGTGGCTGATTTTCAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGAERTVAELGVLMYPGAQMAAVHGLTDLFGVANRIAAEHQATQLPLLRISHWQVDDDHPPVRVYDSHPGADNGLLAVLI
PPSIAGFSAAQMPAGLLPWLREQHARGATLGGVCVGSWLLAESGLLDGRSATTHWTSAKAFAECYPKIRLKADTPIVDDG
DLITTAGLMAWSELGLRLVDRLLGPSIASSTARFLVVEHSDSASACGSNFAPILNHGDAAILKVQHWLQGNGATDVSLTA
MAERAGLEERTFLRRFRAATGLKPTEYCQHLRVGKAREMLEFTNGTIDHIAWTVGYQDPGAFRATFKKITGLAPSEYRTR
FGVSPPAAVAK

Sequences:

>Translated_331_residues
MGAERTVAELGVLMYPGAQMAAVHGLTDLFGVANRIAAEHQATQLPLLRISHWQVDDDHPPVRVYDSHPGADNGLLAVLI
PPSIAGFSAAQMPAGLLPWLREQHARGATLGGVCVGSWLLAESGLLDGRSATTHWTSAKAFAECYPKIRLKADTPIVDDG
DLITTAGLMAWSELGLRLVDRLLGPSIASSTARFLVVEHSDSASACGSNFAPILNHGDAAILKVQHWLQGNGATDVSLTA
MAERAGLEERTFLRRFRAATGLKPTEYCQHLRVGKAREMLEFTNGTIDHIAWTVGYQDPGAFRATFKKITGLAPSEYRTR
FGVSPPAAVAK
>Mature_330_residues
GAERTVAELGVLMYPGAQMAAVHGLTDLFGVANRIAAEHQATQLPLLRISHWQVDDDHPPVRVYDSHPGADNGLLAVLIP
PSIAGFSAAQMPAGLLPWLREQHARGATLGGVCVGSWLLAESGLLDGRSATTHWTSAKAFAECYPKIRLKADTPIVDDGD
LITTAGLMAWSELGLRLVDRLLGPSIASSTARFLVVEHSDSASACGSNFAPILNHGDAAILKVQHWLQGNGATDVSLTAM
AERAGLEERTFLRRFRAATGLKPTEYCQHLRVGKAREMLEFTNGTIDHIAWTVGYQDPGAFRATFKKITGLAPSEYRTRF
GVSPPAAVAK

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35495; Mature: 35364

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAERTVAELGVLMYPGAQMAAVHGLTDLFGVANRIAAEHQATQLPLLRISHWQVDDDHP
CCCCHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC
PVRVYDSHPGADNGLLAVLIPPSIAGFSAAQMPAGLLPWLREQHARGATLGGVCVGSWLL
CEEEEECCCCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
AESGLLDGRSATTHWTSAKAFAECYPKIRLKADTPIVDDGDLITTAGLMAWSELGLRLVD
HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLLGPSIASSTARFLVVEHSDSASACGSNFAPILNHGDAAILKVQHWLQGNGATDVSLTA
HHHCCHHHCCCEEEEEEECCCCHHHCCCCCCHHHCCCCCEEEEEHHHHCCCCCCCEEHHH
MAERAGLEERTFLRRFRAATGLKPTEYCQHLRVGKAREMLEFTNGTIDHIAWTVGYQDPG
HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCC
AFRATFKKITGLAPSEYRTRFGVSPPAAVAK
HHHHHHHHHHCCCCHHHHHHCCCCCCHHCCC
>Mature Secondary Structure 
GAERTVAELGVLMYPGAQMAAVHGLTDLFGVANRIAAEHQATQLPLLRISHWQVDDDHP
CCCHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC
PVRVYDSHPGADNGLLAVLIPPSIAGFSAAQMPAGLLPWLREQHARGATLGGVCVGSWLL
CEEEEECCCCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
AESGLLDGRSATTHWTSAKAFAECYPKIRLKADTPIVDDGDLITTAGLMAWSELGLRLVD
HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLLGPSIASSTARFLVVEHSDSASACGSNFAPILNHGDAAILKVQHWLQGNGATDVSLTA
HHHCCHHHCCCEEEEEEECCCCHHHCCCCCCHHHCCCCCEEEEEHHHHCCCCCCCEEHHH
MAERAGLEERTFLRRFRAATGLKPTEYCQHLRVGKAREMLEFTNGTIDHIAWTVGYQDPG
HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCC
AFRATFKKITGLAPSEYRTRFGVSPPAAVAK
HHHHHHHHHHCCCCHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]