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The map label for this gene is ssb [H]

Identifier: 77461270

GI number: 77461270

Start: 5684611

End: 5685129

Strand: Reverse

Name: ssb [H]

Synonym: Pfl01_5049

Alternate gene names: 77461270

Gene position: 5685129-5684611 (Counterclockwise)

Preceding gene: 77461271

Following gene: 77461262

Centisome position: 88.3

GC content: 60.69

Gene sequence:

>519_bases
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTCGGTACTTGCGGCCAGGATCCCGAAGTACGCTACCTGCCCAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCGACCAGCGAGCAGTGGACCGACAAGCAGACCGGTCAGAAGGTCGAGAAGACCGAGT
GGCACCGCGTATCGATGTTCGGTAAGGTTGCCGAAATCGCCGGCGAATACCTGCGCAAAGGTTCGCAGGTCTACATCGAA
GGCAAGCTGCAGACCCGTGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAGATCGTGGTCGACATGCAAGGCAC
CATGCAACTGCTCGGCGGCCGTCCACAACAGGGCGACCAACAAGGCGGTGGCAACAACTATCAGCAGCAGGCGCCACGCC
AACAGGCTCCGCGTCCGCAGCAGTCGGCACCTCAGCAGCGTTCGGCCCCGGCTCCACAGCAGGCCGCACCGCAACCGGCT
CCGGATTTCGACAGCTTCGATGACGACATTCCGTTCTGA

Upstream 100 bases:

>100_bases
GATCTACATCAAACTGGACACCGAATTAATGGATCGCACCACTCTCGAACGCCTGGTGAACAACCCGGCGCAGACTGCGT
GCGAAGCCTAGGAGAACGTT

Downstream 100 bases:

>100_bases
TTCGCTGCTGTATCCGCGCTAAATAAAAAAGGCCCGTCGCTGAATGCGACGGGCCTTTTTCATGTGCGCGGGTTTTCAGT
CAAGAATCAGATGCGGCAGG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRSAPAPQQAAPQPA
PDFDSFDDDIPF

Sequences:

>Translated_172_residues
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRSAPAPQQAAPQPA
PDFDSFDDDIPF
>Mature_171_residues
ARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIEG
KLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRSAPAPQQAAPQPAP
DFDSFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=110, Percent_Identity=39.0909090909091, Blast_Score=81, Evalue=4e-16,
Organism=Escherichia coli, GI1790494, Length=193, Percent_Identity=53.8860103626943, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19115; Mature: 18984

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMF
CCCCCCEEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHH
GKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQ
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHEEECHHHHHHHCCCCCCCCC
QGGGNNYQQQAPRQQAPRPQQSAPQQRSAPAPQQAAPQPAPDFDSFDDDIPF
CCCCCCHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMF
CCCCCEEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHH
GKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQ
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHEEECHHHHHHHCCCCCCCCC
QGGGNNYQQQAPRQQAPRPQQSAPQQRSAPAPQQAAPQPAPDFDSFDDDIPF
CCCCCCHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]