| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461246
Identifier: 77461246
GI number: 77461246
Start: 5658208
End: 5658801
Strand: Direct
Name: 77461246
Synonym: Pfl01_5025
Alternate gene names: NA
Gene position: 5658208-5658801 (Clockwise)
Preceding gene: 77461244
Following gene: 77461247
Centisome position: 87.88
GC content: 62.79
Gene sequence:
>594_bases ATGCGTCGTCTGCTCCTCGCTTTGCCGTTTGCCCTGTTGCCGCTGGCCATCGCCCAGGCTGCCGATGAACATGATCACGA CCATGAGCACGGCAGCCTCGGTGCCCACGAACATGGCGTCGGTCGCCTGAACGCCGCGCTGGACGGCCAGACCCTGGAAC TGGAGCTGGAAAGCCCGGCAATGAACCTAGTCGGTTTTGAGCACGTCGCCACCAACGATGCCGACAAGGCCAAGGTCGCA GCCGCCCGCGCGCAACTGGAAAAACCGCAGGCGCTGTTCAGTCTGCCGGCCGCCGCCGGTTGCAAAGTCACCCATCAGGA GCTGGAAAGCCCGCTGTTCGGCGACAAGCCGGATGCCGACGATCACGACGAAGAAGAAGCCGGCAAGGACGGTCACGAGC ATCATCACGACCACAGCGAAATCCACGCCCACTACCAGTTCAGCTGCGCGGCACCGGGTGCGTTGAAAACCCTGGATCTG GCGAACCTGTTCAATACCTTCCCGGCCACCCAGAAAATTCAGGTACAACTGATCGGCCCGAGCGGCCAGCAAGGCACGGA AGTGACGGCCAAGGCCGCCGCCCTGAAGTTCTGA
Upstream 100 bases:
>100_bases CCCATGGGACTTGTGTAACGCCAAGCGGGCGGGCAAACTCTGCGCACTTTCGTTATAAGATTACATAACAAACTCTTCAC TTTACTTTCCGGAGACCGCC
Downstream 100 bases:
>100_bases CACGAAACGGCGCCATGACCCAAGCACTCATCGAACTGTCCGACCTGGGCTTCAACTGGCCCGGTCACCCGCCGTTGCTG GACATCCCGGCGTTTCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRRLLLALPFALLPLAIAQAADEHDHDHEHGSLGAHEHGVGRLNAALDGQTLELELESPAMNLVGFEHVATNDADKAKVA AARAQLEKPQALFSLPAAAGCKVTHQELESPLFGDKPDADDHDEEEAGKDGHEHHHDHSEIHAHYQFSCAAPGALKTLDL ANLFNTFPATQKIQVQLIGPSGQQGTEVTAKAAALKF
Sequences:
>Translated_197_residues MRRLLLALPFALLPLAIAQAADEHDHDHEHGSLGAHEHGVGRLNAALDGQTLELELESPAMNLVGFEHVATNDADKAKVA AARAQLEKPQALFSLPAAAGCKVTHQELESPLFGDKPDADDHDEEEAGKDGHEHHHDHSEIHAHYQFSCAAPGALKTLDL ANLFNTFPATQKIQVQLIGPSGQQGTEVTAKAAALKF >Mature_197_residues MRRLLLALPFALLPLAIAQAADEHDHDHEHGSLGAHEHGVGRLNAALDGQTLELELESPAMNLVGFEHVATNDADKAKVA AARAQLEKPQALFSLPAAAGCKVTHQELESPLFGDKPDADDHDEEEAGKDGHEHHHDHSEIHAHYQFSCAAPGALKTLDL ANLFNTFPATQKIQVQLIGPSGQQGTEVTAKAAALKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21095; Mature: 21095
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLLALPFALLPLAIAQAADEHDHDHEHGSLGAHEHGVGRLNAALDGQTLELELESPA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEECCCEEEEEECCCC MNLVGFEHVATNDADKAKVAAARAQLEKPQALFSLPAAAGCKVTHQELESPLFGDKPDAD CCHHEHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEHHHHCCCCCCCCCCCC DHDEEEAGKDGHEHHHDHSEIHAHYQFSCAAPGALKTLDLANLFNTFPATQKIQVQLIGP CCCHHHHCCCCCCCCCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECC SGQQGTEVTAKAAALKF CCCCCCHHHHHHHHCCC >Mature Secondary Structure MRRLLLALPFALLPLAIAQAADEHDHDHEHGSLGAHEHGVGRLNAALDGQTLELELESPA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEECCCEEEEEECCCC MNLVGFEHVATNDADKAKVAAARAQLEKPQALFSLPAAAGCKVTHQELESPLFGDKPDAD CCHHEHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEHHHHCCCCCCCCCCCC DHDEEEAGKDGHEHHHDHSEIHAHYQFSCAAPGALKTLDLANLFNTFPATQKIQVQLIGP CCCHHHHCCCCCCCCCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECC SGQQGTEVTAKAAALKF CCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA