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The map label for this gene is yedA [H]

Identifier: 77461142

GI number: 77461142

Start: 5544831

End: 5545781

Strand: Reverse

Name: yedA [H]

Synonym: Pfl01_4921

Alternate gene names: 77461142

Gene position: 5545781-5544831 (Counterclockwise)

Preceding gene: 77461145

Following gene: 77461141

Centisome position: 86.14

GC content: 63.41

Gene sequence:

>951_bases
ATGTCTGCCTTGCGCCGTTTTTCCTTGCCCTTGATCGCTGCGTTTTTTGCGTTGTACGTGATTTGGGGATCGACCTATCT
GGTGATCCGCATCGGCGTCGAGTACTGGCCGCCGCTGATGCTCGGCGGCGTGCGCTTCGTGATTGCCGGCACGCTGATGT
ACGCGTTCCTGCGCTGGCGCGGGGCACCGGCGCCGACCTGGGCGCAGTGGAAAGCGGCGGGGATCATCGGGATTTTGTTG
CTCAGTTTCGGCAACGGCGCGGTGACCTTGGCCGAGCACAGCGGCGTGGCGTCGGGTGTTGCCGCATTGGCGGTGGCGAC
GGTGCCGCTGTTCACTTTGCTCTGCGGTTATCTCTGGGGCACGCGCAACACCCGCCTGGAGTGGGCCGGGGTGGTGATGG
GGATTATCGGTATCGCGATGCTCAACATGGGCTCCAACCTGCAATCGAGTCCGCTGGGCGCGGCGTTGCTGATTTTCGCC
GCGGCGAGCTGGGCTTTCGGTTCGGTGTGGAGCAAACACCTGCCGTTGCCTCAAGGTGCAATGGCCAGTGCCGTGGAAAT
GCTGGTCGGTGGGGCGGTGTTGCTGATCGGTAGCGCGGCCAGCGGTGAACACCTGCAGGCTATGCCGCCGCTGGAAGGCT
GGCTGGCGCTGGCGTACCTGATCTTCTTCGGCTCGATCATCGCCTTCAACGCTTACATGTATCTGTTGAAAAACGTTCGT
CCTGCGGCAGCCACCAGTTATGCCTACGTCAACCCGGCGGTGGCGGTGTTGCTGGGGATCGTGTTTGTCGGCGAGACCAT
CGGCATCGAAGAAGCGCTGGCGATGCTGGTGATCATCGGCGCGGTGGTGCTGATCAGTCTCCCACAGTGGCGGCGTCCGG
CGCGGCCACCAGTGGTCAGCGAGCCGGCTGCCGCAGCGAAGGTCATAGCGACGGAGCAGCGTGCGAATTAG

Upstream 100 bases:

>100_bases
TCAAAAGTGTACCGGCGCTATAAACAGGTTTTGTAACTTATTTTTAGCGGTTGGCCTTTCTAGAATAACCCATCCCCTGA
GTCTGACTTTCGAGCTGCCC

Downstream 100 bases:

>100_bases
GGTAAACTGCGCGCCATCGCATACTCGTTTTGCACAATCTGCTCTGATTTTTCCTACGGTACTCCCATGACTTTCGCCAC
CCTTGGCCTGATCGAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSALRRFSLPLIAAFFALYVIWGSTYLVIRIGVEYWPPLMLGGVRFVIAGTLMYAFLRWRGAPAPTWAQWKAAGIIGILL
LSFGNGAVTLAEHSGVASGVAALAVATVPLFTLLCGYLWGTRNTRLEWAGVVMGIIGIAMLNMGSNLQSSPLGAALLIFA
AASWAFGSVWSKHLPLPQGAMASAVEMLVGGAVLLIGSAASGEHLQAMPPLEGWLALAYLIFFGSIIAFNAYMYLLKNVR
PAAATSYAYVNPAVAVLLGIVFVGETIGIEEALAMLVIIGAVVLISLPQWRRPARPPVVSEPAAAAKVIATEQRAN

Sequences:

>Translated_316_residues
MSALRRFSLPLIAAFFALYVIWGSTYLVIRIGVEYWPPLMLGGVRFVIAGTLMYAFLRWRGAPAPTWAQWKAAGIIGILL
LSFGNGAVTLAEHSGVASGVAALAVATVPLFTLLCGYLWGTRNTRLEWAGVVMGIIGIAMLNMGSNLQSSPLGAALLIFA
AASWAFGSVWSKHLPLPQGAMASAVEMLVGGAVLLIGSAASGEHLQAMPPLEGWLALAYLIFFGSIIAFNAYMYLLKNVR
PAAATSYAYVNPAVAVLLGIVFVGETIGIEEALAMLVIIGAVVLISLPQWRRPARPPVVSEPAAAAKVIATEQRAN
>Mature_315_residues
SALRRFSLPLIAAFFALYVIWGSTYLVIRIGVEYWPPLMLGGVRFVIAGTLMYAFLRWRGAPAPTWAQWKAAGIIGILLL
SFGNGAVTLAEHSGVASGVAALAVATVPLFTLLCGYLWGTRNTRLEWAGVVMGIIGIAMLNMGSNLQSSPLGAALLIFAA
ASWAFGSVWSKHLPLPQGAMASAVEMLVGGAVLLIGSAASGEHLQAMPPLEGWLALAYLIFFGSIIAFNAYMYLLKNVRP
AAATSYAYVNPAVAVLLGIVFVGETIGIEEALAMLVIIGAVVLISLPQWRRPARPPVVSEPAAAAKVIATEQRAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=302, Percent_Identity=55.6291390728477, Blast_Score=279, Evalue=2e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33396; Mature: 33265

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRRFSLPLIAAFFALYVIWGSTYLVIRIGVEYWPPLMLGGVRFVIAGTLMYAFLRWR
CCCHHHHCHHHHHHHHHHHHHHCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHC
GAPAPTWAQWKAAGIIGILLLSFGNGAVTLAEHSGVASGVAALAVATVPLFTLLCGYLWG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
TRNTRLEWAGVVMGIIGIAMLNMGSNLQSSPLGAALLIFAAASWAFGSVWSKHLPLPQGA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
MASAVEMLVGGAVLLIGSAASGEHLQAMPPLEGWLALAYLIFFGSIIAFNAYMYLLKNVR
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAAATSYAYVNPAVAVLLGIVFVGETIGIEEALAMLVIIGAVVLISLPQWRRPARPPVVS
CHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EPAAAAKVIATEQRAN
CCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SALRRFSLPLIAAFFALYVIWGSTYLVIRIGVEYWPPLMLGGVRFVIAGTLMYAFLRWR
CCHHHHCHHHHHHHHHHHHHHCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHC
GAPAPTWAQWKAAGIIGILLLSFGNGAVTLAEHSGVASGVAALAVATVPLFTLLCGYLWG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
TRNTRLEWAGVVMGIIGIAMLNMGSNLQSSPLGAALLIFAAASWAFGSVWSKHLPLPQGA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
MASAVEMLVGGAVLLIGSAASGEHLQAMPPLEGWLALAYLIFFGSIIAFNAYMYLLKNVR
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAAATSYAYVNPAVAVLLGIVFVGETIGIEEALAMLVIIGAVVLISLPQWRRPARPPVVS
CHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EPAAAAKVIATEQRAN
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]