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The map label for this gene is dinG [H]

Identifier: 77461145

GI number: 77461145

Start: 5549495

End: 5550106

Strand: Reverse

Name: dinG [H]

Synonym: Pfl01_4924

Alternate gene names: 77461145

Gene position: 5550106-5549495 (Counterclockwise)

Preceding gene: 77461146

Following gene: 77461142

Centisome position: 86.2

GC content: 61.6

Gene sequence:

>612_bases
TTGGAACGCATTGCAGTCATCGACTTTGAAACCACCGGCATCTCGCCGAGCAGCAGCTGCCGGGCCACGGAAATCGCCGT
GGTCATGCTGGAAAACGGCCGCATCGTCGAGCGCTACCAGAGCCTGATGAACGCCGGCGTCCGCATCCCGGCCTTCATCG
AACAACTCACCGGCATCAGCAACGCCATGCTGCGCACCGCGCCTTCGGCGGAAAAGGTGATGAACGAAGTCAACGAATTC
GTCGGCTGCACACCCCTGCTGGCGCACAACGCCGCGTTCGACCAGAAGTTCTGGGACTTCGAACTGGGCCGGATCAAACG
CACCCGTTTGCAGAACTTCGCCTGCTCGCTGCTGCTGGCCCGCCGCCTGATGCCGGCGGCGCCGAACCACAAGCTCGGTA
CGCTCACGACCTTTGCCCAACTGCCGCATACCGGTCAGGCGCACAGGGCGATGGCGGATGCGGAGATGGCGGCGAATCTG
ATGGTGCACTTGGCAGGTGAGCTACGGGACAAACACGGTGTGAGCGAGTTGTCCCATGAATTGTTGTGTAAGTTGCAGAG
GGTGCCGGCTGCGAAGGTGGGTGATCATCTTCAGCGCTACAAGGTGCGGTAG

Upstream 100 bases:

>100_bases
TGATCCGCGCCGCCAGCCGTTACGTGCCGATCGAAGGCGCGCTGCTGTTGAAAAATTGAGCGCAAGCTCAAGCATTGATT
TGGACGGAGTACCACCCGGT

Downstream 100 bases:

>100_bases
CGCTGCGGAATTTCGATCAGGTTACAGAGTTTCTCCTCCGGCGGTTTTCTCGGGCAGGAACAGGCTGTCCAGCGCGCGGA
AAGCAAGTCGCAGGTCACTA

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRIPAFIEQLTGISNAMLRTAPSAEKVMNEVNEF
VGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLARRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANL
MVHLAGELRDKHGVSELSHELLCKLQRVPAAKVGDHLQRYKVR

Sequences:

>Translated_203_residues
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRIPAFIEQLTGISNAMLRTAPSAEKVMNEVNEF
VGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLARRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANL
MVHLAGELRDKHGVSELSHELLCKLQRVPAAKVGDHLQRYKVR
>Mature_203_residues
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRIPAFIEQLTGISNAMLRTAPSAEKVMNEVNEF
VGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLARRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANL
MVHLAGELRDKHGVSELSHELLCKLQRVPAAKVGDHLQRYKVR

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 22548; Mature: 22548

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRIPAFIEQLTGIS
CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCHH
NAMLRTAPSAEKVMNEVNEFVGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
HHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLMVHLAGELRDKHGVSELSHE
HHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLCKLQRVPAAKVGDHLQRYKVR
HHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRIPAFIEQLTGIS
CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCHH
NAMLRTAPSAEKVMNEVNEFVGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
HHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLMVHLAGELRDKHGVSELSHE
HHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLCKLQRVPAAKVGDHLQRYKVR
HHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]