| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tesB [H]
Identifier: 77461137
GI number: 77461137
Start: 5539216
End: 5540085
Strand: Reverse
Name: tesB [H]
Synonym: Pfl01_4916
Alternate gene names: 77461137
Gene position: 5540085-5539216 (Counterclockwise)
Preceding gene: 77461138
Following gene: 77461136
Centisome position: 86.05
GC content: 62.64
Gene sequence:
>870_bases ATGAGCCAAGTGTTGGAAGATCTGGTGGATCTGCTGACCCTCGAACCGATCGAGGAAAACCTGTTCCGTGGTCGCAGCCA GGATCTGGGCTTTCGCCAGTTGTTCGGCGGCCAGGTGCTCGGCCAGTCGCTGTCGGCGGCCAGTCAGACCGTTGAAGAAG CGCGCCATGTGCATTCGATGCACGGTTATTTCCTGCGTCCGGGCGATGCCAAGTTGCCGGTGGTCTACTCGGTGGACCGC GTGCGCGACGGCGGCAGTTTCAGCACCCGCCGCGTGACCGCGATCCAGAAGGGCCACCCGATTTTTACCTGCAGCGCTTC GTTTCAGTACGACGAAGAAGGCTTCGAACACCAGAGCCAGATGCCGCAAGTGGTCGGCCCGGAAAACCTGCCGTCGGAGC TGGAACTGACCCAGCAACGCGCGCACCTGATCCCGGAACACATGCGCGAAAAGCTGCTGTGCCCGAAGCCGATCGAAGTG CGCCCGGTCACCGAAAAAGACCCGTACAACCCGCAACCGGCGGATCCGGTCAAGTACGTGTGGTTCCGTGCCGACGGCGC GTTGGCCGACATCCCGGCGCTGCACAAATACCTGCTGGCCTACGCCTCGGACTTCGGTCTGCTGACCACCTCGATGCTGC CGCATGGCAAATCGGTCTGGCAGAAAGACATGCAGGTCGCCAGCCTCGACCACGCTTTGTGGTTCCACAACGACCTGCGC GCCGATGACTGGTTGCTCTACGCCATGGACAGCCCGTGGGCCGGCAATTCGCGTGGATTCTCCCGTGGCAGCGTGTTCAA CCGTGCCGGGCAACTGGTGGCGTCGGTGACCCAGGAAGGCCTGATCCGCCATCGCAAGGACTGGGCATGA
Upstream 100 bases:
>100_bases ACGGACGTTTACAATGGCGCGATCAGTGGCTCGCGCCAGAATCTGAATTGGCCGTCGCAGCCAGGACTGCGCGGCATAGC GTTGTGTGAGGAGAGTCTGA
Downstream 100 bases:
>100_bases GTCTGGCGGAAGTGCGGCACTGGGTGTTCGACATGGACGGCACCCTGACCGTCGCCGTGCACGACTTCGCGGCGATTCGC GTGGCGCTGGCGATCCCGCC
Product: palmitoyl-CoA hydrolase
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSQVLEDLVDLLTLEPIEENLFRGRSQDLGFRQLFGGQVLGQSLSAASQTVEEARHVHSMHGYFLRPGDAKLPVVYSVDR VRDGGSFSTRRVTAIQKGHPIFTCSASFQYDEEGFEHQSQMPQVVGPENLPSELELTQQRAHLIPEHMREKLLCPKPIEV RPVTEKDPYNPQPADPVKYVWFRADGALADIPALHKYLLAYASDFGLLTTSMLPHGKSVWQKDMQVASLDHALWFHNDLR ADDWLLYAMDSPWAGNSRGFSRGSVFNRAGQLVASVTQEGLIRHRKDWA
Sequences:
>Translated_289_residues MSQVLEDLVDLLTLEPIEENLFRGRSQDLGFRQLFGGQVLGQSLSAASQTVEEARHVHSMHGYFLRPGDAKLPVVYSVDR VRDGGSFSTRRVTAIQKGHPIFTCSASFQYDEEGFEHQSQMPQVVGPENLPSELELTQQRAHLIPEHMREKLLCPKPIEV RPVTEKDPYNPQPADPVKYVWFRADGALADIPALHKYLLAYASDFGLLTTSMLPHGKSVWQKDMQVASLDHALWFHNDLR ADDWLLYAMDSPWAGNSRGFSRGSVFNRAGQLVASVTQEGLIRHRKDWA >Mature_288_residues SQVLEDLVDLLTLEPIEENLFRGRSQDLGFRQLFGGQVLGQSLSAASQTVEEARHVHSMHGYFLRPGDAKLPVVYSVDRV RDGGSFSTRRVTAIQKGHPIFTCSASFQYDEEGFEHQSQMPQVVGPENLPSELELTQQRAHLIPEHMREKLLCPKPIEVR PVTEKDPYNPQPADPVKYVWFRADGALADIPALHKYLLAYASDFGLLTTSMLPHGKSVWQKDMQVASLDHALWFHNDLRA DDWLLYAMDSPWAGNSRGFSRGSVFNRAGQLVASVTQEGLIRHRKDWA
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=285, Percent_Identity=42.4561403508772, Blast_Score=218, Evalue=3e-57, Organism=Escherichia coli, GI1786657, Length=284, Percent_Identity=51.056338028169, Blast_Score=299, Evalue=1e-82, Organism=Caenorhabditis elegans, GI71988741, Length=296, Percent_Identity=38.1756756756757, Blast_Score=193, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17558508, Length=308, Percent_Identity=37.6623376623377, Blast_Score=179, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17531889, Length=272, Percent_Identity=36.3970588235294, Blast_Score=158, Evalue=3e-39, Organism=Caenorhabditis elegans, GI115532456, Length=272, Percent_Identity=36.3970588235294, Blast_Score=158, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17531885, Length=272, Percent_Identity=36.3970588235294, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71982224, Length=301, Percent_Identity=30.5647840531561, Blast_Score=121, Evalue=5e-28, Organism=Caenorhabditis elegans, GI212645202, Length=268, Percent_Identity=29.4776119402985, Blast_Score=111, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32621; Mature: 32490
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVLEDLVDLLTLEPIEENLFRGRSQDLGFRQLFGGQVLGQSLSAASQTVEEARHVHSM CHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGYFLRPGDAKLPVVYSVDRVRDGGSFSTRRVTAIQKGHPIFTCSASFQYDEEGFEHQSQ CCEEECCCCCCCCEEEEHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHC MPQVVGPENLPSELELTQQRAHLIPEHMREKLLCPKPIEVRPVTEKDPYNPQPADPVKYV CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEE WFRADGALADIPALHKYLLAYASDFGLLTTSMLPHGKSVWQKDMQVASLDHALWFHNDLR EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC ADDWLLYAMDSPWAGNSRGFSRGSVFNRAGQLVASVTQEGLIRHRKDWA CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQVLEDLVDLLTLEPIEENLFRGRSQDLGFRQLFGGQVLGQSLSAASQTVEEARHVHSM HHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGYFLRPGDAKLPVVYSVDRVRDGGSFSTRRVTAIQKGHPIFTCSASFQYDEEGFEHQSQ CCEEECCCCCCCCEEEEHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHC MPQVVGPENLPSELELTQQRAHLIPEHMREKLLCPKPIEVRPVTEKDPYNPQPADPVKYV CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEE WFRADGALADIPALHKYLLAYASDFGLLTTSMLPHGKSVWQKDMQVASLDHALWFHNDLR EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC ADDWLLYAMDSPWAGNSRGFSRGSVFNRAGQLVASVTQEGLIRHRKDWA CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]