| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gph [C]
Identifier: 77461136
GI number: 77461136
Start: 5538626
End: 5539219
Strand: Reverse
Name: gph [C]
Synonym: Pfl01_4915
Alternate gene names: 77461136
Gene position: 5539219-5538626 (Counterclockwise)
Preceding gene: 77461137
Following gene: 77461131
Centisome position: 86.03
GC content: 66.67
Gene sequence:
>594_bases ATGAGTCTGGCGGAAGTGCGGCACTGGGTGTTCGACATGGACGGCACCCTGACCGTCGCCGTGCACGACTTCGCGGCGAT TCGCGTGGCGCTGGCGATCCCGCCGGAGGACGACATCCTCACCCACCTCGCGGCGTTGCCGGCCGAGGAAGCGGCGGCGA AACATGCGTGGCTGCTGGAACATGAACGCGATCTGGCGCTCGGCTCGACCCCGGCGGTCGGTGCGGTGGAGCTGGTGCGC GACCTGCACGCCCGGGGCTATCGCCTGGGCATCCTGACCCGCAATGCGCGGGAGCTGGCCCACGTGACGCTGGAGGCCAT CGGCCTGGCTGACTGTTTTGCGGTGGAGGATGTGCTGGGTCGTGATGAAGCACAGCCAAAACCGCATCCCGGTGGCCTGC TGAAACTGGCCGGGGCCTGGCAAGTGCCGGCGAGCGAGATGGTGATGGTCGGTGATTACCGGTTTGATCTTGATTGCGGC CGGGCCGCGGGGGCGCACACGGTGCTGGTAAACCTGCCGGATAATCCGTGGCCGGAGCTGACCGACTGGCATGCGAAGGA TTGTGTGGAGTTGCGGCGGATGTTGTTCGCCTGA
Upstream 100 bases:
>100_bases ATTCGCGTGGATTCTCCCGTGGCAGCGTGTTCAACCGTGCCGGGCAACTGGTGGCGTCGGTGACCCAGGAAGGCCTGATC CGCCATCGCAAGGACTGGGC
Downstream 100 bases:
>100_bases AAAGAAACGGGGGCTTCGGCCCCCGTTTTTTATTGCTCGAATAGTGCTTTCTGGCCTTCCGGCGAGGTCAGCATGCCGTC GCCGTTATGCCCGACGCCGG
Product: HAD family hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: HAD Superfamily Hydrolase; Phosphoglycolate Phosphatase PGP; Haloacid Dehalogenase-Like Hydrolase; Phosphatase; Hydrolase/Phosphatase Protein; HAD-Superfamily Hydrolase; Had-Superfamily Hydrolase Protein; Hydrolase; Haloacid Dehalogenase Hydrolase
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSLAEVRHWVFDMDGTLTVAVHDFAAIRVALAIPPEDDILTHLAALPAEEAAAKHAWLLEHERDLALGSTPAVGAVELVR DLHARGYRLGILTRNARELAHVTLEAIGLADCFAVEDVLGRDEAQPKPHPGGLLKLAGAWQVPASEMVMVGDYRFDLDCG RAAGAHTVLVNLPDNPWPELTDWHAKDCVELRRMLFA
Sequences:
>Translated_197_residues MSLAEVRHWVFDMDGTLTVAVHDFAAIRVALAIPPEDDILTHLAALPAEEAAAKHAWLLEHERDLALGSTPAVGAVELVR DLHARGYRLGILTRNARELAHVTLEAIGLADCFAVEDVLGRDEAQPKPHPGGLLKLAGAWQVPASEMVMVGDYRFDLDCG RAAGAHTVLVNLPDNPWPELTDWHAKDCVELRRMLFA >Mature_196_residues SLAEVRHWVFDMDGTLTVAVHDFAAIRVALAIPPEDDILTHLAALPAEEAAAKHAWLLEHERDLALGSTPAVGAVELVRD LHARGYRLGILTRNARELAHVTLEAIGLADCFAVEDVLGRDEAQPKPHPGGLLKLAGAWQVPASEMVMVGDYRFDLDCGR AAGAHTVLVNLPDNPWPELTDWHAKDCVELRRMLFA
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324705, Length=172, Percent_Identity=30.8139534883721, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 21529; Mature: 21398
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAEVRHWVFDMDGTLTVAVHDFAAIRVALAIPPEDDILTHLAALPAEEAAAKHAWLLE CCHHHHHHHHCCCCCEEEEEEECCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHH HERDLALGSTPAVGAVELVRDLHARGYRLGILTRNARELAHVTLEAIGLADCFAVEDVLG CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC RDEAQPKPHPGGLLKLAGAWQVPASEMVMVGDYRFDLDCGRAAGAHTVLVNLPDNPWPEL CCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEEECCCCCCCCC TDWHAKDCVELRRMLFA CCCCHHHHHHHHHHHCC >Mature Secondary Structure SLAEVRHWVFDMDGTLTVAVHDFAAIRVALAIPPEDDILTHLAALPAEEAAAKHAWLLE CHHHHHHHHCCCCCEEEEEEECCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHH HERDLALGSTPAVGAVELVRDLHARGYRLGILTRNARELAHVTLEAIGLADCFAVEDVLG CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC RDEAQPKPHPGGLLKLAGAWQVPASEMVMVGDYRFDLDCGRAAGAHTVLVNLPDNPWPEL CCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEEECCCCCCCCC TDWHAKDCVELRRMLFA CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA