| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461135
Identifier: 77461135
GI number: 77461135
Start: 5537643
End: 5538596
Strand: Direct
Name: 77461135
Synonym: Pfl01_4914
Alternate gene names: NA
Gene position: 5537643-5538596 (Clockwise)
Preceding gene: 77461134
Following gene: 77461139
Centisome position: 86.01
GC content: 61.95
Gene sequence:
>954_bases ATGCATAAATGGCTGTTGGCTTTACTGTTCATCGGCGGCACCGCCCAAGCGGCCGGCGTCGACGCAATCAGTCCCGGGCG CCTGCAATTGCAGGCCGGCGAAATGGCGGTGGGCATCGGCCCGGCGCCGGCGAAAATCGAGCGCGTGCTGATCGTCATTC ATGGCCGTCTGCGTAACGCCGAGACCTATCGCAAAAGCGGTGAAGTCGCGGCGGAACTGGCCGGGCAAACCGCCAACACC CTGGTGATCGCCCCGCAGTTTCTCAACGAAAGCGATGTGTCGCTCTACTCGTTACCCGCCAGCGTGCTGCGCTGGCAAGG CAACGACTGGATGGGCGGCGGGTTATCCACAGGGCCGAACCCGCTGAGTTCCTACGCCGCACTGGACGAAATCGTCGGGC GGCTGAGCGATCGCAAGCAGTTTCCGGACGTGAAGCAGATCGTGATCTTCGGTCACTCCGGCGGCGCGCAGGTGGTGCAG CGTTATGCGCTGCTGGCCCAGGAACAACCGGCGCTCAAGACCGAAGGCATTCGCTTGCGCTACGTGGTCGCCAACCCGTC GTCCTACGCCTACTTCAATGAGCAACGCCCGGTGGCCTTCGATCATGCGAAGTGTCCGGGTTTCAACCGCTGGAAGTACG GACTGATGGACCCGCCGATCTACTCGGGTGGGCAAACGCCCGCGCAGCTTGAAGGCCGTTACGTCAAACGCGAGGTAATT TATCTGCTGGGCCAGCAGGACACCGACCCGCAACATCCGGCGCTGGACAAGAGTTGCGCCGCCAAAGCCCAGGGGGCATA TCGACTGGAGCGCGGGAAGCTGTTTTTCGGTTACTTGCTGCGTCGTCACCCTGAAGGGATCAATCAGCGCCTTATCGAAG TACCCGGCGTCGGGCATAACGGCGACGGCATGCTGACCTCGCCGGAAGGCCAGAAAGCACTATTCGAGCAATAA
Upstream 100 bases:
>100_bases TACCCACGGTACGTCGGCGCAAAGGGTGCGCTGGTTCAAAACCGGATTCGCCCAGGGCCAGGTCGGCCAGTGCGATACCT TTGCGGCGAAAAACCTGTAA
Downstream 100 bases:
>100_bases AAAACGGGGGCCGAAGCCCCCGTTTCTTTTCAGGCGAACAACATCCGCCGCAACTCCACACAATCCTTCGCATGCCAGTC GGTCAGCTCCGGCCACGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MHKWLLALLFIGGTAQAAGVDAISPGRLQLQAGEMAVGIGPAPAKIERVLIVIHGRLRNAETYRKSGEVAAELAGQTANT LVIAPQFLNESDVSLYSLPASVLRWQGNDWMGGGLSTGPNPLSSYAALDEIVGRLSDRKQFPDVKQIVIFGHSGGAQVVQ RYALLAQEQPALKTEGIRLRYVVANPSSYAYFNEQRPVAFDHAKCPGFNRWKYGLMDPPIYSGGQTPAQLEGRYVKREVI YLLGQQDTDPQHPALDKSCAAKAQGAYRLERGKLFFGYLLRRHPEGINQRLIEVPGVGHNGDGMLTSPEGQKALFEQ
Sequences:
>Translated_317_residues MHKWLLALLFIGGTAQAAGVDAISPGRLQLQAGEMAVGIGPAPAKIERVLIVIHGRLRNAETYRKSGEVAAELAGQTANT LVIAPQFLNESDVSLYSLPASVLRWQGNDWMGGGLSTGPNPLSSYAALDEIVGRLSDRKQFPDVKQIVIFGHSGGAQVVQ RYALLAQEQPALKTEGIRLRYVVANPSSYAYFNEQRPVAFDHAKCPGFNRWKYGLMDPPIYSGGQTPAQLEGRYVKREVI YLLGQQDTDPQHPALDKSCAAKAQGAYRLERGKLFFGYLLRRHPEGINQRLIEVPGVGHNGDGMLTSPEGQKALFEQ >Mature_317_residues MHKWLLALLFIGGTAQAAGVDAISPGRLQLQAGEMAVGIGPAPAKIERVLIVIHGRLRNAETYRKSGEVAAELAGQTANT LVIAPQFLNESDVSLYSLPASVLRWQGNDWMGGGLSTGPNPLSSYAALDEIVGRLSDRKQFPDVKQIVIFGHSGGAQVVQ RYALLAQEQPALKTEGIRLRYVVANPSSYAYFNEQRPVAFDHAKCPGFNRWKYGLMDPPIYSGGQTPAQLEGRYVKREVI YLLGQQDTDPQHPALDKSCAAKAQGAYRLERGKLFFGYLLRRHPEGINQRLIEVPGVGHNGDGMLTSPEGQKALFEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34620; Mature: 34620
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKWLLALLFIGGTAQAAGVDAISPGRLQLQAGEMAVGIGPAPAKIERVLIVIHGRLRNA CHHHHEEHHHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHEEEEEEEECCCCCH ETYRKSGEVAAELAGQTANTLVIAPQFLNESDVSLYSLPASVLRWQGNDWMGGGLSTGPN HHHHHCCCHHHHHCCCCCCEEEEEHHHCCCCCCEEEECCHHHHEECCCCCCCCCCCCCCC PLSSYAALDEIVGRLSDRKQFPDVKQIVIFGHSGGAQVVQRYALLAQEQPALKTEGIRLR HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEE YVVANPSSYAYFNEQRPVAFDHAKCPGFNRWKYGLMDPPIYSGGQTPAQLEGRYVKREVI EEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHEEEE YLLGQQDTDPQHPALDKSCAAKAQGAYRLERGKLFFGYLLRRHPEGINQRLIEVPGVGHN EEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCCCC GDGMLTSPEGQKALFEQ CCCCEECCCCCHHHCCC >Mature Secondary Structure MHKWLLALLFIGGTAQAAGVDAISPGRLQLQAGEMAVGIGPAPAKIERVLIVIHGRLRNA CHHHHEEHHHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHEEEEEEEECCCCCH ETYRKSGEVAAELAGQTANTLVIAPQFLNESDVSLYSLPASVLRWQGNDWMGGGLSTGPN HHHHHCCCHHHHHCCCCCCEEEEEHHHCCCCCCEEEECCHHHHEECCCCCCCCCCCCCCC PLSSYAALDEIVGRLSDRKQFPDVKQIVIFGHSGGAQVVQRYALLAQEQPALKTEGIRLR HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEE YVVANPSSYAYFNEQRPVAFDHAKCPGFNRWKYGLMDPPIYSGGQTPAQLEGRYVKREVI EEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHEEEE YLLGQQDTDPQHPALDKSCAAKAQGAYRLERGKLFFGYLLRRHPEGINQRLIEVPGVGHN EEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCCCC GDGMLTSPEGQKALFEQ CCCCEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA