| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is exuT [H]
Identifier: 77461128
GI number: 77461128
Start: 5529716
End: 5531053
Strand: Direct
Name: exuT [H]
Synonym: Pfl01_4907
Alternate gene names: 77461128
Gene position: 5529716-5531053 (Clockwise)
Preceding gene: 77461124
Following gene: 77461132
Centisome position: 85.89
GC content: 62.03
Gene sequence:
>1338_bases ATGATTCCTTCACAGACTTCCCGCATGGCTCCGGCCATGAGCACTGCCACGGGTGGCATCGGCGACAAGATCCGCGGCGC CATGGCCGTCGGCAAGACCCGTTGGGGCATGCTGGCGCTGGTGTTTTTCGCCACCACCCTCAATTACATCGACCGCGCCG CCCTCGGCGTCATGCAGCCGATCCTTGCCAAGGAAATGAGCTGGACGGCGATGGACTACGCCAACATCAACTTCTGGTTT CAGGTCGGCTACGCGATCGGCTTCGTGCTGCAAGGACGACTGATCGACCGGGTCGGCGTCAAGCGCGTGTTCTTCTGCGC GGTGCTGCTCTGGAGCCTGGCCACCGGTGCCCACGGTCTGGCGACCTCGGCGGTGGGCTTCATGGTCTGCCGGTTCATCC TCGGCCTGACTGAAGCGGCGAACTACCCGGCCTGCGTAAAGACCACGCGCCTGTGGTTCCCGGCCGGCGAGCGCGCCGTG GCCACCGGCATCTTCAACGCCGGCACCAACGTCGGTGCGATGTTCACTCCGATGCTGCTGCCACTGATCCTTCACGTGTG GGGCTGGCAGGCCGCGTTCCTGTGCATGTCGGCGCTGGGCGGGATCTGGCTGCTGTTCTGGGGCCTGAAGTATTTCAACC CTGAAGATCACCCGAGCGTGAAACAGTCGGAGCTGGAATACATCCAGAAAGAAGTCGAACCGGAACAGGCCCGCGTGCCG TTCTCGAAAATCCTGCGCATGCGCGGCACCTGGGCCTTCGCCCTCGCCTACTCGCTGACCGCGCCGGTGTTCTGGTTCTA CCTGTACTGGCTGCCGCCGTTTCTCAATCAGCAATACAACCTGGGCATCAACGTCACCCAGATGGGCATTCCGCTGATCA TCATCTACGTCACCGCCGACTTCGGCAGCGTGGGCGGCGGGATTCTGTCTTCGTTCCTGATCGGTCGCGGCATGAACTCG ATCAAGGCTCGACTGCTGTCGATGTTCCTGTTCGCCTGCTGCATCATTGGTGTGGTCATGGCCGCCGGCTCCGCCAACCT GTGGATCGCGGTTGCCGCCATCTCCCTGGCCATCGGCGCGCATCAGGCCTGGACCGCCAACATCTGGAGCCTGGTGATGG ACTACACGCCCAAGCACATGATGAGCACGGTGTTCGGTTTCGGCGGCATGTGCGCGGCGATCGGCGGGATGTTCATGACC CAGATCGTCGGCCACATCCTGACCGTCACCAACAACAACTACACCGTGCTGTTCACTCTGATCCCGGCGATGTACTTCAT TGCCCTGACCTGGATGTACTTCATGGCACCGCGCAAGATTCCTACCGTCACTGAGTAG
Upstream 100 bases:
>100_bases GCCCAACATCCCTTTCACCTTGAGTCCGGAACTGAACCACCGGTCGCAGCGTGCACAAAAAAAGCACACCAAATAACAAA TCCAAAAACGGGTGGAACAC
Downstream 100 bases:
>100_bases CCTTCCAATACTGAATAACCTTCCTGCACCGACCGGCCTGATTTCAGGCCGGTTTTGCTTTTAGCGCCGGCTCTGCTGCC ACGCTGCCGCCAGCCCGCTG
Product: major facilitator transporter
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MIPSQTSRMAPAMSTATGGIGDKIRGAMAVGKTRWGMLALVFFATTLNYIDRAALGVMQPILAKEMSWTAMDYANINFWF QVGYAIGFVLQGRLIDRVGVKRVFFCAVLLWSLATGAHGLATSAVGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAV ATGIFNAGTNVGAMFTPMLLPLILHVWGWQAAFLCMSALGGIWLLFWGLKYFNPEDHPSVKQSELEYIQKEVEPEQARVP FSKILRMRGTWAFALAYSLTAPVFWFYLYWLPPFLNQQYNLGINVTQMGIPLIIIYVTADFGSVGGGILSSFLIGRGMNS IKARLLSMFLFACCIIGVVMAAGSANLWIAVAAISLAIGAHQAWTANIWSLVMDYTPKHMMSTVFGFGGMCAAIGGMFMT QIVGHILTVTNNNYTVLFTLIPAMYFIALTWMYFMAPRKIPTVTE
Sequences:
>Translated_445_residues MIPSQTSRMAPAMSTATGGIGDKIRGAMAVGKTRWGMLALVFFATTLNYIDRAALGVMQPILAKEMSWTAMDYANINFWF QVGYAIGFVLQGRLIDRVGVKRVFFCAVLLWSLATGAHGLATSAVGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAV ATGIFNAGTNVGAMFTPMLLPLILHVWGWQAAFLCMSALGGIWLLFWGLKYFNPEDHPSVKQSELEYIQKEVEPEQARVP FSKILRMRGTWAFALAYSLTAPVFWFYLYWLPPFLNQQYNLGINVTQMGIPLIIIYVTADFGSVGGGILSSFLIGRGMNS IKARLLSMFLFACCIIGVVMAAGSANLWIAVAAISLAIGAHQAWTANIWSLVMDYTPKHMMSTVFGFGGMCAAIGGMFMT QIVGHILTVTNNNYTVLFTLIPAMYFIALTWMYFMAPRKIPTVTE >Mature_445_residues MIPSQTSRMAPAMSTATGGIGDKIRGAMAVGKTRWGMLALVFFATTLNYIDRAALGVMQPILAKEMSWTAMDYANINFWF QVGYAIGFVLQGRLIDRVGVKRVFFCAVLLWSLATGAHGLATSAVGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAV ATGIFNAGTNVGAMFTPMLLPLILHVWGWQAAFLCMSALGGIWLLFWGLKYFNPEDHPSVKQSELEYIQKEVEPEQARVP FSKILRMRGTWAFALAYSLTAPVFWFYLYWLPPFLNQQYNLGINVTQMGIPLIIIYVTADFGSVGGGILSSFLIGRGMNS IKARLLSMFLFACCIIGVVMAAGSANLWIAVAAISLAIGAHQAWTANIWSLVMDYTPKHMMSTVFGFGGMCAAIGGMFMT QIVGHILTVTNNNYTVLFTLIPAMYFIALTWMYFMAPRKIPTVTE
Specific function: Aldohexuronate transport system [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI154350196, Length=437, Percent_Identity=23.7986270022883, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI9966811, Length=344, Percent_Identity=23.2558139534884, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI9945322, Length=357, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI2367193, Length=378, Percent_Identity=30.6878306878307, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1789515, Length=400, Percent_Identity=27.5, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789152, Length=411, Percent_Identity=27.7372262773723, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI2367379, Length=411, Percent_Identity=26.0340632603406, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI87082320, Length=391, Percent_Identity=26.0869565217391, Blast_Score=128, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17535049, Length=407, Percent_Identity=23.8329238329238, Blast_Score=101, Evalue=9e-22, Organism=Caenorhabditis elegans, GI115533556, Length=458, Percent_Identity=25.5458515283843, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533554, Length=398, Percent_Identity=26.3819095477387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17552542, Length=283, Percent_Identity=26.1484098939929, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560030, Length=180, Percent_Identity=24.4444444444444, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920686, Length=385, Percent_Identity=23.3766233766234, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI24583789, Length=380, Percent_Identity=22.1052631578947, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129235, Length=366, Percent_Identity=27.3224043715847, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641682, Length=270, Percent_Identity=24.8148148148148, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI62484226, Length=322, Percent_Identity=25.776397515528, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24584153, Length=355, Percent_Identity=23.0985915492958, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580790, Length=207, Percent_Identity=24.6376811594203, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48997; Mature: 48997
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSQTSRMAPAMSTATGGIGDKIRGAMAVGKTRWGMLALVFFATTLNYIDRAALGVMQP CCCCCCHHCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAKEMSWTAMDYANINFWFQVGYAIGFVLQGRLIDRVGVKRVFFCAVLLWSLATGAHGL HHHHHCCHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ATSAVGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAVATGIFNAGTNVGAMFTPMLL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHCCCCCHHHHHHHHH PLILHVWGWQAAFLCMSALGGIWLLFWGLKYFNPEDHPSVKQSELEYIQKEVEPEQARVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCCC FSKILRMRGTWAFALAYSLTAPVFWFYLYWLPPFLNQQYNLGINVTQMGIPLIIIYVTAD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEECCCCEEEEEEECC FGSVGGGILSSFLIGRGMNSIKARLLSMFLFACCIIGVVMAAGSANLWIAVAAISLAIGA CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC HQAWTANIWSLVMDYTPKHMMSTVFGFGGMCAAIGGMFMTQIVGHILTVTNNNYTVLFTL CCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHH IPAMYFIALTWMYFMAPRKIPTVTE HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIPSQTSRMAPAMSTATGGIGDKIRGAMAVGKTRWGMLALVFFATTLNYIDRAALGVMQP CCCCCCHHCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAKEMSWTAMDYANINFWFQVGYAIGFVLQGRLIDRVGVKRVFFCAVLLWSLATGAHGL HHHHHCCHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ATSAVGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAVATGIFNAGTNVGAMFTPMLL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHCCCCCHHHHHHHHH PLILHVWGWQAAFLCMSALGGIWLLFWGLKYFNPEDHPSVKQSELEYIQKEVEPEQARVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCCC FSKILRMRGTWAFALAYSLTAPVFWFYLYWLPPFLNQQYNLGINVTQMGIPLIIIYVTAD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEECCCCEEEEEEECC FGSVGGGILSSFLIGRGMNSIKARLLSMFLFACCIIGVVMAAGSANLWIAVAAISLAIGA CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC HQAWTANIWSLVMDYTPKHMMSTVFGFGGMCAAIGGMFMTQIVGHILTVTNNNYTVLFTL CCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHH IPAMYFIALTWMYFMAPRKIPTVTE HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]