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The map label for this gene is yajL [H]

Identifier: 77461116

GI number: 77461116

Start: 5519585

End: 5520136

Strand: Reverse

Name: yajL [H]

Synonym: Pfl01_4895

Alternate gene names: 77461116

Gene position: 5520136-5519585 (Counterclockwise)

Preceding gene: 77461117

Following gene: 77461114

Centisome position: 85.74

GC content: 64.31

Gene sequence:

>552_bases
ATGACCTATAGAGCCCTGATTACCCTCGCCGAGGGCATCGATGATCTGCAATGCGTGACCCTGATCGACGTGCTGCGCCG
CGCCGGCATCGAAGTAGTGGCGGCCAGCATCGAGGGCCGGCGCATGCTGACCTGCGCCCGAGGCACGCGATTGACCGCCG
ACGGCATGCTCATTGATGTGCTGGCCCAGACCTTCGACCTGATTGTCCTGCCCGGTGGTGCCGTCGGTGCGCAACACTTG
GCCGCGCACCAGCCTCTGCAACAATTGCTCAAGGACCAGGCCAGCGCCGGACGCCTGTTCGCCGCCATCGCCGAAGCCCC
GGCCGTCGCCCTGCAAAGCTTCGGTGTATTACGTCAACGCCGGATGACCTGCCTGCCCGTCAGCAGTCATAACCTTTCCG
GTTGCACGTTTGTTGATCAACCTGTGGTGGTCGACGGTAATTGCATCACCGCCCAGGGCTCCGGCGCCGCGCTTGCGTTT
GCGCTGACACTGGTCGAGCAACTGGCGGGCAAGGCCGTCAGAGCGAAGGTGGCGGGGGAGTTGCTGGCCTGA

Upstream 100 bases:

>100_bases
AACACGATGTCGACCCAGCTTTACATCAAGTAACGGCTGTCGCCGAACAGGGCAGGGCAAAGCTGACTACGCTTTAAAGA
CCACCCAGCGGAAAGCGCCC

Downstream 100 bases:

>100_bases
GAGCGTCAGGCCTTCACCTCTTCCACCGGCACATGCATCCGGTCGCGGTTGGCCAGGGTCGGGAACAGTTTGATCCAGGT
TCCGGTCACCACCAGCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTYRALITLAEGIDDLQCVTLIDVLRRAGIEVVAASIEGRRMLTCARGTRLTADGMLIDVLAQTFDLIVLPGGAVGAQHL
AAHQPLQQLLKDQASAGRLFAAIAEAPAVALQSFGVLRQRRMTCLPVSSHNLSGCTFVDQPVVVDGNCITAQGSGAALAF
ALTLVEQLAGKAVRAKVAGELLA

Sequences:

>Translated_183_residues
MTYRALITLAEGIDDLQCVTLIDVLRRAGIEVVAASIEGRRMLTCARGTRLTADGMLIDVLAQTFDLIVLPGGAVGAQHL
AAHQPLQQLLKDQASAGRLFAAIAEAPAVALQSFGVLRQRRMTCLPVSSHNLSGCTFVDQPVVVDGNCITAQGSGAALAF
ALTLVEQLAGKAVRAKVAGELLA
>Mature_182_residues
TYRALITLAEGIDDLQCVTLIDVLRRAGIEVVAASIEGRRMLTCARGTRLTADGMLIDVLAQTFDLIVLPGGAVGAQHLA
AHQPLQQLLKDQASAGRLFAAIAEAPAVALQSFGVLRQRRMTCLPVSSHNLSGCTFVDQPVVVDGNCITAQGSGAALAFA
LTLVEQLAGKAVRAKVAGELLA

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=185, Percent_Identity=34.5945945945946, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI31543380, Length=185, Percent_Identity=34.5945945945946, Blast_Score=105, Evalue=3e-23,
Organism=Escherichia coli, GI87081736, Length=186, Percent_Identity=35.4838709677419, Blast_Score=107, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17531319, Length=170, Percent_Identity=40, Blast_Score=104, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17558714, Length=169, Percent_Identity=36.094674556213, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28571932, Length=184, Percent_Identity=39.1304347826087, Blast_Score=116, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24653499, Length=182, Percent_Identity=35.1648351648352, Blast_Score=93, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19103; Mature: 18971

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRALITLAEGIDDLQCVTLIDVLRRAGIEVVAASIEGRRMLTCARGTRLTADGMLIDV
CCHHHEEHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEECCCCHHHHH
LAQTFDLIVLPGGAVGAQHLAAHQPLQQLLKDQASAGRLFAAIAEAPAVALQSFGVLRQR
HHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
RMTCLPVSSHNLSGCTFVDQPVVVDGNCITAQGSGAALAFALTLVEQLAGKAVRAKVAGE
CCEEEECCCCCCCCCEEECCCEEECCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHH
LLA
HCC
>Mature Secondary Structure 
TYRALITLAEGIDDLQCVTLIDVLRRAGIEVVAASIEGRRMLTCARGTRLTADGMLIDV
CHHHEEHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEECCCCHHHHH
LAQTFDLIVLPGGAVGAQHLAAHQPLQQLLKDQASAGRLFAAIAEAPAVALQSFGVLRQR
HHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
RMTCLPVSSHNLSGCTFVDQPVVVDGNCITAQGSGAALAFALTLVEQLAGKAVRAKVAGE
CCEEEECCCCCCCCCEEECCCEEECCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHH
LLA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]