| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461117
Identifier: 77461117
GI number: 77461117
Start: 5520204
End: 5520734
Strand: Reverse
Name: 77461117
Synonym: Pfl01_4896
Alternate gene names: NA
Gene position: 5520734-5520204 (Counterclockwise)
Preceding gene: 77461120
Following gene: 77461116
Centisome position: 85.75
GC content: 59.51
Gene sequence:
>531_bases ATGTTGGTGTCGATCGTCGGCGAAGTTTTGCACCACGGCCAAGTACGCCATACTGCGCGCTGTTTTTCGGGGATGAATCG CATGAACAAGGGTTGGACCAACACTGCCGGACTGATGGCCTTGCTGCTGACCGGTGTACCGGCGGTATTCGCGGCGTCGG CACCGCCGTTGAGCGAGGTGAAAGTCATCAAGGTTCAGTCGTCGTCCTGCGGGCTCGAAGACATTACCGATGGCCAGGTG CAGACCCGTTGCGATCACAGCGCGCCGGGCATCAAGGTGTACGTGCTGGAAATCGGCTACGGCCAGAGTCAGCCTCAGGC AGCACTGGACGGTTTCGAAGTGAACGGCACCCGGAGTCCGGTCTGTGCCTTCGATAACGGCAACCTGACCGAGTGCACGC CCGGCAGCAAAACCGTCGGCTCGCTGTATACCTTCGATCTGGCGGCCCGTCAGGAAGGCACCTTTACCTTCAGCAACACG TCGATCAACGCCCCGCGCAACACGATGTCGACCCAGCTTTACATCAAGTAA
Upstream 100 bases:
>100_bases CGACCTCAACAGCAAAGCACAGACCGTCGCAAGCGCCTGGAAAATTGTGGTGGGCCGGAAAAAGCCGCGCATCATACCAG CAGCGTGAGCAAGATGGCGG
Downstream 100 bases:
>100_bases CGGCTGTCGCCGAACAGGGCAGGGCAAAGCTGACTACGCTTTAAAGACCACCCAGCGGAAAGCGCCCATGACCTATAGAG CCCTGATTACCCTCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLVSIVGEVLHHGQVRHTARCFSGMNRMNKGWTNTAGLMALLLTGVPAVFAASAPPLSEVKVIKVQSSSCGLEDITDGQV QTRCDHSAPGIKVYVLEIGYGQSQPQAALDGFEVNGTRSPVCAFDNGNLTECTPGSKTVGSLYTFDLAARQEGTFTFSNT SINAPRNTMSTQLYIK
Sequences:
>Translated_176_residues MLVSIVGEVLHHGQVRHTARCFSGMNRMNKGWTNTAGLMALLLTGVPAVFAASAPPLSEVKVIKVQSSSCGLEDITDGQV QTRCDHSAPGIKVYVLEIGYGQSQPQAALDGFEVNGTRSPVCAFDNGNLTECTPGSKTVGSLYTFDLAARQEGTFTFSNT SINAPRNTMSTQLYIK >Mature_176_residues MLVSIVGEVLHHGQVRHTARCFSGMNRMNKGWTNTAGLMALLLTGVPAVFAASAPPLSEVKVIKVQSSSCGLEDITDGQV QTRCDHSAPGIKVYVLEIGYGQSQPQAALDGFEVNGTRSPVCAFDNGNLTECTPGSKTVGSLYTFDLAARQEGTFTFSNT SINAPRNTMSTQLYIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18774; Mature: 18774
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSIVGEVLHHGQVRHTARCFSGMNRMNKGWTNTAGLMALLLTGVPAVFAASAPPLSEV CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCE KVIKVQSSSCGLEDITDGQVQTRCDHSAPGIKVYVLEIGYGQSQPQAALDGFEVNGTRSP EEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCHHHCCEEECCCCCC VCAFDNGNLTECTPGSKTVGSLYTFDLAARQEGTFTFSNTSINAPRNTMSTQLYIK EEEECCCCCCEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MLVSIVGEVLHHGQVRHTARCFSGMNRMNKGWTNTAGLMALLLTGVPAVFAASAPPLSEV CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCE KVIKVQSSSCGLEDITDGQVQTRCDHSAPGIKVYVLEIGYGQSQPQAALDGFEVNGTRSP EEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCHHHCCEEECCCCCC VCAFDNGNLTECTPGSKTVGSLYTFDLAARQEGTFTFSNTSINAPRNTMSTQLYIK EEEECCCCCCEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA