Click here to switch to the map view.

The map label for this gene is yjiY [H]

Identifier: 77461104

GI number: 77461104

Start: 5505734

End: 5507800

Strand: Reverse

Name: yjiY [H]

Synonym: Pfl01_4883

Alternate gene names: 77461104

Gene position: 5507800-5505734 (Counterclockwise)

Preceding gene: 77461106

Following gene: 77461103

Centisome position: 85.55

GC content: 61.2

Gene sequence:

>2067_bases
ATGAAAAATAATAATAGCCTGCTACGCCACTTACCCTGGCTGCTGCTGGCAATCGTAGGAGCGTGCGCCCTTGGCGTAGT
GGCATTGCGCCGAGGCGAGGCGATCAACGCCTTGTGGATTGTGGTCGCCGCCGTGGCCATCTATCTGGTTGCGTACCGTT
ACTACAGTCTGTTCATCGCTAACAATGTGATGCAACTCGATCCGCGTCGGGCCACCCCCGCCGTGCTCAACAACGACGGT
CTGGACTACGTTCCAACCAACAAACACATTCTCTTCGGTCACCACTTCGCGGCCATCGCCGGCGCGGGACCTCTGGTTGG
CCCGGTACTGGCGGCGCAGATGGGCTATCTGCCCGGTACGCTGTGGCTGATCGCCGGCGTGGTGCTGGCGGGTGCGGTGC
AGGACTTCATGGTCCTGTTCATGTCGACCCGTCGCAACGGCCGTTCGCTGGGTGACATGGTGCGTGAAGAAATGGGCCGT
ATCCCCGGCACCATCGCCCTGTTCGGCTGCTTCCTGATCATGATCATCATCCTCGCGGTGCTGGCGCTGATCGTGGTGAA
AGCCCTGGCTGAGAGCCCGTGGGGCATCTTCACCGTGATGGCGACCATCCCGATCGCGATGTTCATGGGCATCTACATGC
GCTACATCCGTCCGGGCCGCATCGGCGAGATCTCGGTAGTCGGCGTGTTGCTGCTGCTGGGTTCGATCTGGCTGGGTGGG
CAGATTGCCGCCGATCCGGTCTGGGCCAAGGCCTTCACCTTCACTGGCGTGCAGATTACCTGGATGCTGGTCGGTTACGG
TTTCGTCGCCGCTTCGCTGCCGGTGTGGCTGATTCTGGCGCCGCGTGACTATCTCTCCACGTTCCTCAAGATCGGTACCA
TCGTCGCCTTGGCGATCGGCATCCTGGTGACCATGCCCGAGCTGAAAATGCCGGCACTGACCCAGTTCGTCGACGGCACC
GGCCCGGTGTGGAAGGGCGGTCTGTTCCCGTTCCTGTTCATCACCATCGCTTGCGGTGCGGTATCCGGTTTCCACGCGCT
GATCTCTTCCGGGACCACGCCGAAGCTGCTGGATAACGAAACCAACGCCCGTTACATCGGTTACGGCGGCATGCTGATGG
AATCGTTCGTGGCCATCATGGCCATGGTCGCTGCCTCGGTGATCGAGCCAGGCGTGTACTTCGCCATGAACAGCCCGGCC
GCCGTGGTCGGCGGTGATGTGGTGTCCGTGGCAACCGCAGTCAGTAACTGGGGCTTTGCAATTACCCCGGAAGCCCTGCA
AGCCGTGGCGCATGACATCGGCGAAACCACCATTCTGGCTCGTGCCGGTGGTGCACCGACCCTGGCGGTCGGTATCGCGC
AGATCCTGCACAGTGTCCTGCCGGGTGAAAACACCATGGCGTTCTGGTACCACTTCGCGATCCTGTTCGAAGCGCTGTTC
ATTCTGACCGCAGTCGATGCCGGTACACGTGCCGGTCGCTTCATGCTGCAGGACTTGCTCGGCTCCTTCGTGCCGGCACT
CAAACGTACTGAATCCTGGTCCGCCAACCTGATCGCCACCGCCGGTTGTGTGGCGATGTGGGGCTGGTTGCTGTATCAGG
GCGTGGTCGATCCACTGGGCGGGATCAACACCCTGTGGCCGCTGTTCGGTATCTCCAACCAGATGCTCGCCGGTATCGCG
CTGATGCTCGGTACCGTGGTCCTGATCAAGATGAAGCGCCAGCGTTACATCTGGGTCACCCTGCTGCCGGCCACCTGGCT
GCTGATCTGCACCACGACTGCAGGCTTCATCAAGCTGTTCGACGCCAACCCGGCGATCGGCTTCCTGTCGCTGGCCAAGA
AGTACAGCGATGCACTGGCCAACGGTCAGGTGCTGGCGCCGGCGAAAAGCGTCGAGCAGATGCAGCACGTGATCTTCAAC
GCCTACACCAACGCTACATTGACCGCGCTGTTCCTGTTCGTGGTATTCAGCATCCTGTTCTATGCGCTCAAGGTCGGCAT
CGCCGCCTGGGGCAAAAAAGAGCGTACGGACAAAGAATCGCCATTCCAGGCCCTGCCGGACGCGTAA

Upstream 100 bases:

>100_bases
AATGGACTGTCTAGACCAATGTCGGGGTATGGCCTTTGCCGCCAGTAGCGCTAAACTCGGGGTGGCTGTCTTTCTTGTCC
ACCCTGGCTGGAATAATAAA

Downstream 100 bases:

>100_bases
CCAGAGGATTGCAGCATGTTCAATGACCTCAGTCGCCTCGGTAAATACCTCGGTCAGGCCGCGCGCCTGATGGTCGGCAT
GCCCGACTACGACACCTACG

Product: carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MKNNNSLLRHLPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLVAYRYYSLFIANNVMQLDPRRATPAVLNNDG
LDYVPTNKHILFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFMSTRRNGRSLGDMVREEMGR
IPGTIALFGCFLIMIIILAVLALIVVKALAESPWGIFTVMATIPIAMFMGIYMRYIRPGRIGEISVVGVLLLLGSIWLGG
QIAADPVWAKAFTFTGVQITWMLVGYGFVAASLPVWLILAPRDYLSTFLKIGTIVALAIGILVTMPELKMPALTQFVDGT
GPVWKGGLFPFLFITIACGAVSGFHALISSGTTPKLLDNETNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPA
AVVGGDVVSVATAVSNWGFAITPEALQAVAHDIGETTILARAGGAPTLAVGIAQILHSVLPGENTMAFWYHFAILFEALF
ILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWSANLIATAGCVAMWGWLLYQGVVDPLGGINTLWPLFGISNQMLAGIA
LMLGTVVLIKMKRQRYIWVTLLPATWLLICTTTAGFIKLFDANPAIGFLSLAKKYSDALANGQVLAPAKSVEQMQHVIFN
AYTNATLTALFLFVVFSILFYALKVGIAAWGKKERTDKESPFQALPDA

Sequences:

>Translated_688_residues
MKNNNSLLRHLPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLVAYRYYSLFIANNVMQLDPRRATPAVLNNDG
LDYVPTNKHILFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFMSTRRNGRSLGDMVREEMGR
IPGTIALFGCFLIMIIILAVLALIVVKALAESPWGIFTVMATIPIAMFMGIYMRYIRPGRIGEISVVGVLLLLGSIWLGG
QIAADPVWAKAFTFTGVQITWMLVGYGFVAASLPVWLILAPRDYLSTFLKIGTIVALAIGILVTMPELKMPALTQFVDGT
GPVWKGGLFPFLFITIACGAVSGFHALISSGTTPKLLDNETNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPA
AVVGGDVVSVATAVSNWGFAITPEALQAVAHDIGETTILARAGGAPTLAVGIAQILHSVLPGENTMAFWYHFAILFEALF
ILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWSANLIATAGCVAMWGWLLYQGVVDPLGGINTLWPLFGISNQMLAGIA
LMLGTVVLIKMKRQRYIWVTLLPATWLLICTTTAGFIKLFDANPAIGFLSLAKKYSDALANGQVLAPAKSVEQMQHVIFN
AYTNATLTALFLFVVFSILFYALKVGIAAWGKKERTDKESPFQALPDA
>Mature_688_residues
MKNNNSLLRHLPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLVAYRYYSLFIANNVMQLDPRRATPAVLNNDG
LDYVPTNKHILFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFMSTRRNGRSLGDMVREEMGR
IPGTIALFGCFLIMIIILAVLALIVVKALAESPWGIFTVMATIPIAMFMGIYMRYIRPGRIGEISVVGVLLLLGSIWLGG
QIAADPVWAKAFTFTGVQITWMLVGYGFVAASLPVWLILAPRDYLSTFLKIGTIVALAIGILVTMPELKMPALTQFVDGT
GPVWKGGLFPFLFITIACGAVSGFHALISSGTTPKLLDNETNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPA
AVVGGDVVSVATAVSNWGFAITPEALQAVAHDIGETTILARAGGAPTLAVGIAQILHSVLPGENTMAFWYHFAILFEALF
ILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWSANLIATAGCVAMWGWLLYQGVVDPLGGINTLWPLFGISNQMLAGIA
LMLGTVVLIKMKRQRYIWVTLLPATWLLICTTTAGFIKLFDANPAIGFLSLAKKYSDALANGQVLAPAKSVEQMQHVIFN
AYTNATLTALFLFVVFSILFYALKVGIAAWGKKERTDKESPFQALPDA

Specific function: Unknown

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI87082431, Length=708, Percent_Identity=68.361581920904, Blast_Score=986, Evalue=0.0,
Organism=Escherichia coli, GI1786814, Length=689, Percent_Identity=66.7634252539913, Blast_Score=923, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 73859; Mature: 73859

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNNSLLRHLPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLVAYRYYSLFIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NNVMQLDPRRATPAVLNNDGLDYVPTNKHILFGHHFAAIAGAGPLVGPVLAAQMGYLPGT
CCCCEECCCCCCCCEECCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCHH
LWLIAGVVLAGAVQDFMVLFMSTRRNGRSLGDMVREEMGRIPGTIALFGCFLIMIIILAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LALIVVKALAESPWGIFTVMATIPIAMFMGIYMRYIRPGRIGEISVVGVLLLLGSIWLGG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
QIAADPVWAKAFTFTGVQITWMLVGYGFVAASLPVWLILAPRDYLSTFLKIGTIVALAIG
EECCCCHHHHHHEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH
ILVTMPELKMPALTQFVDGTGPVWKGGLFPFLFITIACGAVSGFHALISSGTTPKLLDNE
HHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPAAVVGGDVVSVATAVSNWGFA
CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCHHHHHHHHHHCCCCE
ITPEALQAVAHDIGETTILARAGGAPTLAVGIAQILHSVLPGENTMAFWYHFAILFEALF
ECHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWSANLIATAGCVAMWGWLLYQGVVDPLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GINTLWPLFGISNQMLAGIALMLGTVVLIKMKRQRYIWVTLLPATWLLICTTTAGFIKLF
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCHHHEEEE
DANPAIGFLSLAKKYSDALANGQVLAPAKSVEQMQHVIFNAYTNATLTALFLFVVFSILF
CCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YALKVGIAAWGKKERTDKESPFQALPDA
HHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNNNSLLRHLPWLLLAIVGACALGVVALRRGEAINALWIVVAAVAIYLVAYRYYSLFIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NNVMQLDPRRATPAVLNNDGLDYVPTNKHILFGHHFAAIAGAGPLVGPVLAAQMGYLPGT
CCCCEECCCCCCCCEECCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCHH
LWLIAGVVLAGAVQDFMVLFMSTRRNGRSLGDMVREEMGRIPGTIALFGCFLIMIIILAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LALIVVKALAESPWGIFTVMATIPIAMFMGIYMRYIRPGRIGEISVVGVLLLLGSIWLGG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
QIAADPVWAKAFTFTGVQITWMLVGYGFVAASLPVWLILAPRDYLSTFLKIGTIVALAIG
EECCCCHHHHHHEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH
ILVTMPELKMPALTQFVDGTGPVWKGGLFPFLFITIACGAVSGFHALISSGTTPKLLDNE
HHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPAAVVGGDVVSVATAVSNWGFA
CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCHHHHHHHHHHCCCCE
ITPEALQAVAHDIGETTILARAGGAPTLAVGIAQILHSVLPGENTMAFWYHFAILFEALF
ECHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWSANLIATAGCVAMWGWLLYQGVVDPLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GINTLWPLFGISNQMLAGIALMLGTVVLIKMKRQRYIWVTLLPATWLLICTTTAGFIKLF
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCHHHEEEE
DANPAIGFLSLAKKYSDALANGQVLAPAKSVEQMQHVIFNAYTNATLTALFLFVVFSILF
CCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YALKVGIAAWGKKERTDKESPFQALPDA
HHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]