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The map label for this gene is yvaQ [H]

Identifier: 77461054

GI number: 77461054

Start: 5449326

End: 5450951

Strand: Reverse

Name: yvaQ [H]

Synonym: Pfl01_4833

Alternate gene names: 77461054

Gene position: 5450951-5449326 (Counterclockwise)

Preceding gene: 77461055

Following gene: 77461048

Centisome position: 84.66

GC content: 63.16

Gene sequence:

>1626_bases
ATGTTGCTTCGTCAGTTGAATATTGCTCCCCGTGCCGCCTTGGGCTTCGCCCTGATCGCGGTGCTGGTGGCATTGCTGGG
GGTGTTTGCGCTGGGGCAGATGTCGAGCATCCGCGACAGCGAAGTGGCAGTGGAGACTCAATGGCTGCCGAGCATTCGCG
GCGGTGACGAGATTCGCGAGATCATGTTGCGCATTCGCACCATTTCCCTGCGCATGGCGCTGGATCAGGATCCGGCCAAC
ATCGCCACCTACCGCAGTCAGATGGACACCCGCGACAGGGAACTGAGCGAGAAAATCGCCGCCTACGACCGGCTGGTGAC
CACCCCGGAAGGGCAGCAGTTGTACGATCAGTTCAAGAAAACCTTCGCTGCCTACCGCACCGGCATCGCCCAGTCGTTCA
CCCTCGCGGAGCAAGGCAAGCGCGATGAGCTGACCAAGCTGCTGCTGGTCGACATGAAAACCGTGGTCGACGGCTCCGGT
AAACAACTCAATGACCTGGCAGACCTGTTCGCCCGTCAGGTCGCCGCTGAAAGCCAGAACTCTGCCGCCCACTACGAAAC
CTCGCGCACTATCGTGAGCTTGTTCATTGCTTTGGCGGCGCTGGCCACCGTCGCCTTGGCCATGTTGCTGACCCGCAGCA
TCGTCCGCCCCCTGAGCGCCGCCGTCGACGCCGCTGAGCACGTCGCCAGAGGCGATCTGACCCGTCCGATCGAAACTCAC
GGCAACGATGAGGTCAGCCGTCTGCTCAAGGCGTTGGCGACCATGCAGCAGAACCTGCGCGAAACCCTGCAGGGCATCAG
TGGCTCGGCCACGCAACTGGCGACCGCTTCCGACGAACTGAGCGCGGTGACCCACGACAGCACGCAAGGGCTGCAGCAGC
AGAACAACGAAATCGAACAAGCCGCCACCGCGGTCAACGAGATGACCACAGCGGTGGAGGAAGTCGCTCGCAATGCGGTG
TCGACGTCCGACGCCACCCGCCAGTCCAGCGAGTCGGCGCAGTTGGGTCAGGAGCGGGTCAGTGAAACTGCTGGCGCCAT
CAACGCCCTGGCCAGTGAAGTCGAGCACACTGGTGAGTTGGTGCAATCGCTGGCCAATCAGTCGCAAGACATCGGCAAAG
TGCTGGATGTGATCCGGGCGATCGCCGAACAGACCAACCTGCTGGCACTCAACGCCGCCATCGAAGCCGCGCGGGCCGGG
GAGAGCGGACGCGGGTTTGCGGTGGTCGCCGATGAAGTCCGGGCGCTGGCTTATCGCACTCAGCAATCGACCCAGGAAAT
CGAGCAGATGGTGCAGGGCATGCGCAACGGTTCGAGCCTGGCGCTGGAGTCGATGCAGGCCAGTGCCTCGCGGGCGGCCA
CTACGCTGGTGCTGGCGGAGCGGGCCGGTGAAGCGTTGCAGACGATCACGGCCTCGGTAAACGAAATCCACGAGCGCAAT
CTGGTGATCGCCAGCGCCGCCGAAGAACAGGCGCAGGTGGCGCGGGAAGTGGATCGCAATCTGGTGAACATACGCGATCT
GTCGGTGCGCTCGGCGGCGGGTGCCGATCAAACCAACGCGTCGAGCCATGAACTGTCGCAACTGGCCAACGCCCTGCAAG
GCATGGTGCGACGCTTCCAGCTGTAA

Upstream 100 bases:

>100_bases
TTCAAGTCGTCATACAACTTGCCGATAGCCCGCTAACGAAAGGGGCCTGCCGCATCAAGCGCCCCTGAATTCTGCCAATA
CAAGAAAAAGGGCGTTCGTC

Downstream 100 bases:

>100_bases
TCGTGCAGGCGTGAAAAAGCCGCGCTTCTCGTCAGAGAAAGCGCGGCTTTGTTTTATCGGGCAGGCTGAGAAATCAGGCA
CCGTCCTGGTCTTTCAGGTG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MLLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIREIMLRIRTISLRMALDQDPAN
IATYRSQMDTRDRELSEKIAAYDRLVTTPEGQQLYDQFKKTFAAYRTGIAQSFTLAEQGKRDELTKLLLVDMKTVVDGSG
KQLNDLADLFARQVAAESQNSAAHYETSRTIVSLFIALAALATVALAMLLTRSIVRPLSAAVDAAEHVARGDLTRPIETH
GNDEVSRLLKALATMQQNLRETLQGISGSATQLATASDELSAVTHDSTQGLQQQNNEIEQAATAVNEMTTAVEEVARNAV
STSDATRQSSESAQLGQERVSETAGAINALASEVEHTGELVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAG
ESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRNGSSLALESMQASASRAATTLVLAERAGEALQTITASVNEIHERN
LVIASAAEEQAQVAREVDRNLVNIRDLSVRSAAGADQTNASSHELSQLANALQGMVRRFQL

Sequences:

>Translated_541_residues
MLLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIREIMLRIRTISLRMALDQDPAN
IATYRSQMDTRDRELSEKIAAYDRLVTTPEGQQLYDQFKKTFAAYRTGIAQSFTLAEQGKRDELTKLLLVDMKTVVDGSG
KQLNDLADLFARQVAAESQNSAAHYETSRTIVSLFIALAALATVALAMLLTRSIVRPLSAAVDAAEHVARGDLTRPIETH
GNDEVSRLLKALATMQQNLRETLQGISGSATQLATASDELSAVTHDSTQGLQQQNNEIEQAATAVNEMTTAVEEVARNAV
STSDATRQSSESAQLGQERVSETAGAINALASEVEHTGELVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAG
ESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRNGSSLALESMQASASRAATTLVLAERAGEALQTITASVNEIHERN
LVIASAAEEQAQVAREVDRNLVNIRDLSVRSAAGADQTNASSHELSQLANALQGMVRRFQL
>Mature_541_residues
MLLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIREIMLRIRTISLRMALDQDPAN
IATYRSQMDTRDRELSEKIAAYDRLVTTPEGQQLYDQFKKTFAAYRTGIAQSFTLAEQGKRDELTKLLLVDMKTVVDGSG
KQLNDLADLFARQVAAESQNSAAHYETSRTIVSLFIALAALATVALAMLLTRSIVRPLSAAVDAAEHVARGDLTRPIETH
GNDEVSRLLKALATMQQNLRETLQGISGSATQLATASDELSAVTHDSTQGLQQQNNEIEQAATAVNEMTTAVEEVARNAV
STSDATRQSSESAQLGQERVSETAGAINALASEVEHTGELVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAG
ESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRNGSSLALESMQASASRAATTLVLAERAGEALQTITASVNEIHERN
LVIASAAEEQAQVAREVDRNLVNIRDLSVRSAAGADQTNASSHELSQLANALQGMVRRFQL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=385, Percent_Identity=30.9090909090909, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=32.3450134770889, Blast_Score=143, Evalue=3e-35,
Organism=Escherichia coli, GI1787690, Length=454, Percent_Identity=29.5154185022026, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=32.3232323232323, Blast_Score=125, Evalue=9e-30,
Organism=Escherichia coli, GI1789453, Length=234, Percent_Identity=29.0598290598291, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58216; Mature: 58216

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCCCHHHHHH
IMLRIRTISLRMALDQDPANIATYRSQMDTRDRELSEKIAAYDRLVTTPEGQQLYDQFKK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TFAAYRTGIAQSFTLAEQGKRDELTKLLLVDMKTVVDGSGKQLNDLADLFARQVAAESQN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
SAAHYETSRTIVSLFIALAALATVALAMLLTRSIVRPLSAAVDAAEHVARGDLTRPIETH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
GNDEVSRLLKALATMQQNLRETLQGISGSATQLATASDELSAVTHDSTQGLQQQNNEIEQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHH
AATAVNEMTTAVEEVARNAVSTSDATRQSSESAQLGQERVSETAGAINALASEVEHTGEL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRT
HHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
QQSTQEIEQMVQGMRNGSSLALESMQASASRAATTLVLAERAGEALQTITASVNEIHERN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVIASAAEEQAQVAREVDRNLVNIRDLSVRSAAGADQTNASSHELSQLANALQGMVRRFQ
EEEEECHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure
MLLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCCCHHHHHH
IMLRIRTISLRMALDQDPANIATYRSQMDTRDRELSEKIAAYDRLVTTPEGQQLYDQFKK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TFAAYRTGIAQSFTLAEQGKRDELTKLLLVDMKTVVDGSGKQLNDLADLFARQVAAESQN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
SAAHYETSRTIVSLFIALAALATVALAMLLTRSIVRPLSAAVDAAEHVARGDLTRPIETH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
GNDEVSRLLKALATMQQNLRETLQGISGSATQLATASDELSAVTHDSTQGLQQQNNEIEQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHH
AATAVNEMTTAVEEVARNAVSTSDATRQSSESAQLGQERVSETAGAINALASEVEHTGEL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRT
HHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
QQSTQEIEQMVQGMRNGSSLALESMQASASRAATTLVLAERAGEALQTITASVNEIHERN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVIASAAEEQAQVAREVDRNLVNIRDLSVRSAAGADQTNASSHELSQLANALQGMVRRFQ
EEEEECHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]