| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yacG [C]
Identifier: 77461045
GI number: 77461045
Start: 5444125
End: 5444325
Strand: Direct
Name: yacG [C]
Synonym: Pfl01_4824
Alternate gene names: 77461045
Gene position: 5444125-5444325 (Clockwise)
Preceding gene: 77461044
Following gene: 77461049
Centisome position: 84.56
GC content: 62.69
Gene sequence:
>201_bases ATGAGCCAGACCCCAACCGTCAACTGCCCGACTTGCGGCGCGCCCGTGGAATTCACCCCGGAGAACAAATACCGTCCGTT CTGCTCGGACCGCTGCAAACTCATCGACCTCGGCGCCTGGGCGTCGGAAGAACACAAGATTCCGGTGGCCCCGGATGCCG AGGACGAACTGTTTTCCGGCGACTTCGACCCGCGTCACTGA
Upstream 100 bases:
>100_bases GTGCCGACGATGTGGTGGTCAACGACCGCGACCTCGCTTGGCTGCACAGCGAGGTCGAGCGCCTGCATCACTTTTACCTG ACTTTATCCGGAGGCCAATC
Downstream 100 bases:
>100_bases TCGCGCTCAGGGCCGCATGAAGCCGTAGTCCTGATCGTCGTCGAGGTTTTCCGCCAGAAAGCGCAACTCGTCGGCCAGGT CTTCGGCGTTGCGCACCGCC
Product: zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSQTPTVNCPTCGAPVEFTPENKYRPFCSDRCKLIDLGAWASEEHKIPVAPDAEDELFSGDFDPRH
Sequences:
>Translated_66_residues MSQTPTVNCPTCGAPVEFTPENKYRPFCSDRCKLIDLGAWASEEHKIPVAPDAEDELFSGDFDPRH >Mature_65_residues SQTPTVNCPTCGAPVEFTPENKYRPFCSDRCKLIDLGAWASEEHKIPVAPDAEDELFSGDFDPRH
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
Organism=Escherichia coli, GI1786290, Length=52, Percent_Identity=59.6153846153846, Blast_Score=69, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4824_PSEPF (Q3K6P3)
Other databases:
- EMBL: CP000094 - RefSeq: YP_350552.1 - ProteinModelPortal: Q3K6P3 - SMR: Q3K6P3 - STRING: Q3K6P3 - GeneID: 3717260 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_4824 - eggNOG: COG3024 - HOGENOM: HBG552546 - OMA: EWGPQSP - ProtClustDB: PRK00418 - BioCyc: PFLU205922:PFL_4824-MONOMER - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 7368; Mature: 7237
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPTVNCPTCGAPVEFTPENKYRPFCSDRCKLIDLGAWASEEHKIPVAPDAEDELFSG CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC DFDPRH CCCCCC >Mature Secondary Structure SQTPTVNCPTCGAPVEFTPENKYRPFCSDRCKLIDLGAWASEEHKIPVAPDAEDELFSG CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC DFDPRH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA