| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is panC
Identifier: 77461033
GI number: 77461033
Start: 5428771
End: 5429631
Strand: Direct
Name: panC
Synonym: Pfl01_4812
Alternate gene names: 77461033
Gene position: 5428771-5429631 (Clockwise)
Preceding gene: 77461032
Following gene: 77461034
Centisome position: 84.32
GC content: 63.53
Gene sequence:
>861_bases ATGAACACCGTCAAAACCGTACGTGAACTGCGCGCCGCCGTGGCGCGCGCCCGCAGTGAAGGCAAGCGCATCGGCTTCGT GCCGACCATGGGCAACCTGCACAGCGGCCACATTGCCCTGATCACCAAGGCCACCCAGCGCGTGGACTTCGTGGTCGCGA GCATTTTCGTCAACCCGCTGCAGTTCGGTGCCGGCGAAGACCTCGACAAATACCCGCGTACCCTGGCGGCGGATCAGGAA AAACTGCTGGAAGCCGGATGCGATCTGCTGTTCGCCCCGACTGTCGAAGAAATGTATCCCGACGGCATGGCCGGGCAGAC CCGGGTCAGCGTTCCGCAACTGTCCGAAGGCCTCTGCGGCGCCAGCCGTCCGGGGCACTTCGAAGGCGTGGCGACAGTGG TCAGCAAGCTGTTCAACATGGTCCAGCCGGACCTGGCGATCTTCGGCCAGAAAGACTTCCAGCAACTGGCGGTGATCCGC GCACTGGTGCACGACCTGAACATGCCGATCCAGATCATCGGCGAGCCGACCGTACGCGCCGCCGACGGTCTGGCGCTGTC CTCGCGCAACGGTTTCCTCAGTGAAGAAGAACGCGCCGTGGCGCCAGTGGTCTATCGCACCCTGAGCAGCATTGCCGAGT CGATCAAGCAGGGCGAACGCGACTTCCCTGCCCTGATCCAGGCGCAACGCCAGCAACTGGAAGCCGCCGGGCTGCGTCCG GATTATCTGGAAATCCGCCACGCCCTGACCCTGCGTCCGGCAACGGCGGAAGATCGTGATCTGGTGATTCTGGTCGCGGC ATTTCTCGGCACCACCCGGTTGATCGACAACCTGCATCTGAATCTCGATACCCCCGCCTGA
Upstream 100 bases:
>100_bases ACTTCATGCAGGGTCAGGACAGCATCCAGTCCGCGCTGAAGGCTTACGTCAGTGAAGTCAAAGCCACCACTTTCCCCGGG ATCGAACACGGATTCTCTGC
Downstream 100 bases:
>100_bases ACACCGGCAGACGCTGTGGAGGCGACCCCGCTCCCACAGCGTCTGCACGCACTTCCAGACTGTATTGCTGAGCACCTGCC CATCGGGCAAACTGCCCGCC
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHSGHIALITKATQRVDFVVASIFVNPLQFGAGEDLDKYPRTLAADQE KLLEAGCDLLFAPTVEEMYPDGMAGQTRVSVPQLSEGLCGASRPGHFEGVATVVSKLFNMVQPDLAIFGQKDFQQLAVIR ALVHDLNMPIQIIGEPTVRAADGLALSSRNGFLSEEERAVAPVVYRTLSSIAESIKQGERDFPALIQAQRQQLEAAGLRP DYLEIRHALTLRPATAEDRDLVILVAAFLGTTRLIDNLHLNLDTPA
Sequences:
>Translated_286_residues MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHSGHIALITKATQRVDFVVASIFVNPLQFGAGEDLDKYPRTLAADQE KLLEAGCDLLFAPTVEEMYPDGMAGQTRVSVPQLSEGLCGASRPGHFEGVATVVSKLFNMVQPDLAIFGQKDFQQLAVIR ALVHDLNMPIQIIGEPTVRAADGLALSSRNGFLSEEERAVAPVVYRTLSSIAESIKQGERDFPALIQAQRQQLEAAGLRP DYLEIRHALTLRPATAEDRDLVILVAAFLGTTRLIDNLHLNLDTPA >Mature_286_residues MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHSGHIALITKATQRVDFVVASIFVNPLQFGAGEDLDKYPRTLAADQE KLLEAGCDLLFAPTVEEMYPDGMAGQTRVSVPQLSEGLCGASRPGHFEGVATVVSKLFNMVQPDLAIFGQKDFQQLAVIR ALVHDLNMPIQIIGEPTVRAADGLALSSRNGFLSEEERAVAPVVYRTLSSIAESIKQGERDFPALIQAQRQQLEAAGLRP DYLEIRHALTLRPATAEDRDLVILVAAFLGTTRLIDNLHLNLDTPA
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=282, Percent_Identity=54.6099290780142, Blast_Score=309, Evalue=1e-85, Organism=Saccharomyces cerevisiae, GI6322046, Length=304, Percent_Identity=38.4868421052632, Blast_Score=185, Evalue=9e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_PSEPF (Q3K6Q5)
Other databases:
- EMBL: CP000094 - RefSeq: YP_350540.1 - HSSP: P0A5R0 - ProteinModelPortal: Q3K6Q5 - SMR: Q3K6Q5 - STRING: Q3K6Q5 - GeneID: 3717248 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_4812 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: RLIDNFT - ProtClustDB: PRK00380 - BioCyc: PFLU205922:PFL_4812-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31148; Mature: 31148
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: ACT_SITE 37-37 BINDING 61-61 BINDING 61-61 BINDING 155-155 BINDING 178-178
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHSGHIALITKATQRVDFVVASIFVNPL CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH QFGAGEDLDKYPRTLAADQEKLLEAGCDLLFAPTVEEMYPDGMAGQTRVSVPQLSEGLCG HCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCCCCCCCHHHHCCCCC ASRPGHFEGVATVVSKLFNMVQPDLAIFGQKDFQQLAVIRALVHDLNMPIQIIGEPTVRA CCCCCCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHH ADGLALSSRNGFLSEEERAVAPVVYRTLSSIAESIKQGERDFPALIQAQRQQLEAAGLRP CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC DYLEIRHALTLRPATAEDRDLVILVAAFLGTTRLIDNLHLNLDTPA HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCC >Mature Secondary Structure MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHSGHIALITKATQRVDFVVASIFVNPL CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH QFGAGEDLDKYPRTLAADQEKLLEAGCDLLFAPTVEEMYPDGMAGQTRVSVPQLSEGLCG HCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCCCCCCCHHHHCCCCC ASRPGHFEGVATVVSKLFNMVQPDLAIFGQKDFQQLAVIRALVHDLNMPIQIIGEPTVRA CCCCCCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHH ADGLALSSRNGFLSEEERAVAPVVYRTLSSIAESIKQGERDFPALIQAQRQQLEAAGLRP CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC DYLEIRHALTLRPATAEDRDLVILVAAFLGTTRLIDNLHLNLDTPA HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA