| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461018
Identifier: 77461018
GI number: 77461018
Start: 5412711
End: 5413562
Strand: Reverse
Name: 77461018
Synonym: Pfl01_4797
Alternate gene names: NA
Gene position: 5413562-5412711 (Counterclockwise)
Preceding gene: 77461019
Following gene: 77461013
Centisome position: 84.08
GC content: 60.09
Gene sequence:
>852_bases ATGCGCGGGATTTTGCTGTTGGCGGTGTTGTGGCTTGCGGGTTGCCAGCATGTTGCGGCGCCGCCGGTCGTGGGCGAGAT TCGTGATCTGCGCAGCGGCGAGCGTCTGACGGCGCAGCAATTACTGACGCAACTGAGCAGACCGGCGCGGGTGATCGTTG GCGAGCAGCATGACAACGCCGATCACCATGCCCTTCAATTGTGGTTGTTGCAGAACCTCGAACAAACGCGTCCACAAGGC AGTCTCCTGCTGGAAATGCTGACGCCCGATCAACAGTCGCGGGTCGATGATGTGCGACATGCTGCAACGCCACCAACTGA TCTTCCTGCTGCATTGGCCTGGCAGGATGGTTGGGACTGGAATCTCTACGGCCCGATTGTGCGGTTCGCCCTGACGCAAT CCTGGCCGTTGCTGGCAGCCAACCTCGATAACATCGAAATTCGCGCGTTCTATCGCGATCCTCCGGTTCTGAGCGGGGAG CGCAGCAACGCTAAATTTGTGAAAGAAACGCTGTTGGAGCAGATCGGCGATTCTCACTGCGGCTTGCTGCCGTCAGCACA AATGCCGGCGATGCTGGCTGTTCAGCAGCAACGGGATCGGCGAATGGCATCGCGTTTATTGGCGGCCTCCGCGCCTGCCT TGTTGTTGGCGGGTGCTTATCACGCGCGCAAGGACGTGGGGGTGCCGCTGCATGTGCTGGATCTGGGCGCGCCCGAGGCG CCGACGGTGCTGATGCTGGCGGAGCAGGGCAGTCAGATTACGGCGGCGATGGCTGATTATGTCTGGTTCACAGCGACCAA GCCGAAACCGGATTATTGCGCCGAGATGCGTAAGCAGTTCGGCAAGAAATGA
Upstream 100 bases:
>100_bases CTGAAGGCGGTTTTCGGTCTGGAAGTGCTGGTGCAAACGCACCCGGAGCGCGGGCATCCGCTGATCATCGCCCGCTGATT TCATCATCGAGGGTGAGGGT
Downstream 100 bases:
>100_bases CTTTTCCACAGGCAAAAAAAGACCCGGTAAAAACCGGGTCAAATAACCGTGATTAGCCTGATGAGGAGATAATCTGAGAG TCCGAACCAAGGGCTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRGILLLAVLWLAGCQHVAAPPVVGEIRDLRSGERLTAQQLLTQLSRPARVIVGEQHDNADHHALQLWLLQNLEQTRPQG SLLLEMLTPDQQSRVDDVRHAATPPTDLPAALAWQDGWDWNLYGPIVRFALTQSWPLLAANLDNIEIRAFYRDPPVLSGE RSNAKFVKETLLEQIGDSHCGLLPSAQMPAMLAVQQQRDRRMASRLLAASAPALLLAGAYHARKDVGVPLHVLDLGAPEA PTVLMLAEQGSQITAAMADYVWFTATKPKPDYCAEMRKQFGKK
Sequences:
>Translated_283_residues MRGILLLAVLWLAGCQHVAAPPVVGEIRDLRSGERLTAQQLLTQLSRPARVIVGEQHDNADHHALQLWLLQNLEQTRPQG SLLLEMLTPDQQSRVDDVRHAATPPTDLPAALAWQDGWDWNLYGPIVRFALTQSWPLLAANLDNIEIRAFYRDPPVLSGE RSNAKFVKETLLEQIGDSHCGLLPSAQMPAMLAVQQQRDRRMASRLLAASAPALLLAGAYHARKDVGVPLHVLDLGAPEA PTVLMLAEQGSQITAAMADYVWFTATKPKPDYCAEMRKQFGKK >Mature_283_residues MRGILLLAVLWLAGCQHVAAPPVVGEIRDLRSGERLTAQQLLTQLSRPARVIVGEQHDNADHHALQLWLLQNLEQTRPQG SLLLEMLTPDQQSRVDDVRHAATPPTDLPAALAWQDGWDWNLYGPIVRFALTQSWPLLAANLDNIEIRAFYRDPPVLSGE RSNAKFVKETLLEQIGDSHCGLLPSAQMPAMLAVQQQRDRRMASRLLAASAPALLLAGAYHARKDVGVPLHVLDLGAPEA PTVLMLAEQGSQITAAMADYVWFTATKPKPDYCAEMRKQFGKK
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31290; Mature: 31290
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGILLLAVLWLAGCQHVAAPPVVGEIRDLRSGERLTAQQLLTQLSRPARVIVGEQHDNA CCHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCC DHHALQLWLLQNLEQTRPQGSLLLEMLTPDQQSRVDDVRHAATPPTDLPAALAWQDGWDW HHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCC NLYGPIVRFALTQSWPLLAANLDNIEIRAFYRDPPVLSGERSNAKFVKETLLEQIGDSHC CHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC GLLPSAQMPAMLAVQQQRDRRMASRLLAASAPALLLAGAYHARKDVGVPLHVLDLGAPEA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC PTVLMLAEQGSQITAAMADYVWFTATKPKPDYCAEMRKQFGKK CEEEEEECCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRGILLLAVLWLAGCQHVAAPPVVGEIRDLRSGERLTAQQLLTQLSRPARVIVGEQHDNA CCHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCC DHHALQLWLLQNLEQTRPQGSLLLEMLTPDQQSRVDDVRHAATPPTDLPAALAWQDGWDW HHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCC NLYGPIVRFALTQSWPLLAANLDNIEIRAFYRDPPVLSGERSNAKFVKETLLEQIGDSHC CHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC GLLPSAQMPAMLAVQQQRDRRMASRLLAASAPALLLAGAYHARKDVGVPLHVLDLGAPEA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC PTVLMLAEQGSQITAAMADYVWFTATKPKPDYCAEMRKQFGKK CEEEEEECCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA