| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461012
Identifier: 77461012
GI number: 77461012
Start: 5405987
End: 5406733
Strand: Reverse
Name: 77461012
Synonym: Pfl01_4791
Alternate gene names: NA
Gene position: 5406733-5405987 (Counterclockwise)
Preceding gene: 77461013
Following gene: 77461011
Centisome position: 83.98
GC content: 65.86
Gene sequence:
>747_bases GTGAACAAGTGGTTGATTCCAGCGGTGACCGCCGTGGCTTTGCTCAGCGGCTGCTCCACCGTACAGCGTGGTTCGATCCC GGTTGTGGACTCCGGCACCGCCGTGTCCAACAGCGAGCGGATTTCGGCCAATGGCGGTTTCCGTCAAACGACGGTGAAAC GTCCTGCACAGGCCCAGGCTCAGGCGATCCCGCAAGGCGATACCGGTGTGGTAGTGATGGTGCCGGGCGGCGCAGCGGCT TCGGCGCCGATCAGCACTTCGCCAATCGTTCCGGGCCCGGCGTCCGGTGGCATCACGCCGGGGCCGTATAACCCTTCGCC GGTCGAGTCGGCGCCGATCAGCTCCGGCAGTTACAGCATGCCTTCGACGCCGAGCGGCATTCCTTCGGCCAGCAGTGGTG GCGGTCTGTCTGCCGATGAGCAGCTGGACGGCCCGGTTCTCGCACTGTTGACCACTGCGCAACAGCAGCAGGCCGGTGGC GACCTCAATGGTGCGTCCTCCAGCCTGGAACGCGCCCAGCGTGTAGCGCCGCGCGAGCCGCAAGTGCTTTACCGTCTGGC GCAGGTGCGCATGGCCCAGGGCGATGCGCCGCAAGCCGAGCAGACCGCTCGTCGCGCACTGACCATGGCCAATGGTCGTC CGGACTTGCAGGCCAGTCTGTGGGAATTGATCGCTCAGGCACGTGAGAAGCAAGGTGATTCCGCCGGCGCCACTCTGGCC CGTCAGAAGGCCAAGGTTTCGCTGTGA
Upstream 100 bases:
>100_bases CCGCCACCCGGCGCCTCCTGCGCGGGCGAAAGCCCGGCCTCGGGCGAGTCGGTGATGGATTGGGTCAAGGGCTGGATGAA TTAAGCAAAGAGGGTTTCAA
Downstream 100 bases:
>100_bases TGGACAGTCGTTTCTCCAAGGTCGCCGATCAATTGCTGTTGATCGAGCGTGAACTGCGCGCCCAGGGCTGGTGGGATGAC GTCCAGCCCTCGGTCGAAGC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNKWLIPAVTAVALLSGCSTVQRGSIPVVDSGTAVSNSERISANGGFRQTTVKRPAQAQAQAIPQGDTGVVVMVPGGAAA SAPISTSPIVPGPASGGITPGPYNPSPVESAPISSGSYSMPSTPSGIPSASSGGGLSADEQLDGPVLALLTTAQQQQAGG DLNGASSSLERAQRVAPREPQVLYRLAQVRMAQGDAPQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLA RQKAKVSL
Sequences:
>Translated_248_residues MNKWLIPAVTAVALLSGCSTVQRGSIPVVDSGTAVSNSERISANGGFRQTTVKRPAQAQAQAIPQGDTGVVVMVPGGAAA SAPISTSPIVPGPASGGITPGPYNPSPVESAPISSGSYSMPSTPSGIPSASSGGGLSADEQLDGPVLALLTTAQQQQAGG DLNGASSSLERAQRVAPREPQVLYRLAQVRMAQGDAPQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLA RQKAKVSL >Mature_248_residues MNKWLIPAVTAVALLSGCSTVQRGSIPVVDSGTAVSNSERISANGGFRQTTVKRPAQAQAQAIPQGDTGVVVMVPGGAAA SAPISTSPIVPGPASGGITPGPYNPSPVESAPISSGSYSMPSTPSGIPSASSGGGLSADEQLDGPVLALLTTAQQQQAGG DLNGASSSLERAQRVAPREPQVLYRLAQVRMAQGDAPQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLA RQKAKVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25086; Mature: 25086
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKWLIPAVTAVALLSGCSTVQRGSIPVVDSGTAVSNSERISANGGFRQTTVKRPAQAQA CCCCHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCCCCCEEECCCCCCHHHHCCCHHHHH QAIPQGDTGVVVMVPGGAAASAPISTSPIVPGPASGGITPGPYNPSPVESAPISSGSYSM HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSTPSGIPSASSGGGLSADEQLDGPVLALLTTAQQQQAGGDLNGASSSLERAQRVAPREP CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCH QVLYRLAQVRMAQGDAPQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH RQKAKVSL HHHHHCCC >Mature Secondary Structure MNKWLIPAVTAVALLSGCSTVQRGSIPVVDSGTAVSNSERISANGGFRQTTVKRPAQAQA CCCCHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCCCCCEEECCCCCCHHHHCCCHHHHH QAIPQGDTGVVVMVPGGAAASAPISTSPIVPGPASGGITPGPYNPSPVESAPISSGSYSM HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSTPSGIPSASSGGGLSADEQLDGPVLALLTTAQQQQAGGDLNGASSSLERAQRVAPREP CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCH QVLYRLAQVRMAQGDAPQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH RQKAKVSL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA