| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461010
Identifier: 77461010
GI number: 77461010
Start: 5405217
End: 5405633
Strand: Direct
Name: 77461010
Synonym: Pfl01_4789
Alternate gene names: NA
Gene position: 5405217-5405633 (Clockwise)
Preceding gene: 77461000
Following gene: 77461014
Centisome position: 83.95
GC content: 57.07
Gene sequence:
>417_bases ATGCGAACGCTTCTCTTAACTCTGCTAATCAGCGTCAGCCCATGGTGTATGGCCGGTCAGATCTACAGATGGGTCGATGC CCAGGGGGTCACCCATTTCGATCAACAGCCACCACAAGGGCAGTCATCCACCGCCGTGAAGACGCCCTCCTCTACCGCAC CCAAACCAGCGGCACTGCCTGGCAGCGGCGCGCTGGGCGATCAGAAAGCCATCGATGACAAGGTCAAGAAGCAAGTGGCG GAGCAGCAGAACCAACTCAAGGCATTTTGCGAACAGGCGCGAACGAATCTCGCGCAACTGCAGAACAATCCGCGCTTGAG GGAGGAAGTGGAGGGAGAATTGCGGCGGCTGAATGACGAGCAGCGCCAGCAACGTACTGAAGAGGCAAAGAAACAGATAG CGGAAAACTGCCAGTAA
Upstream 100 bases:
>100_bases CAATGTGCTTAATTGTGGGTAAGCACATGAGAACGCAAGAAAAAACCCGGAAACCGCTACTCTGTTAGCTTCAATTGCGC AGTTTTGCCAAGGAATCAGC
Downstream 100 bases:
>100_bases CGACTGGCAGCTCCCGGTTCAGCGTGAAGCGGTGATCAGCAGGTCGAACTCTTTGAGCAACACCTGAAGCTGCCGATCCT TGCCCTGCAGATTGCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRTLLLTLLISVSPWCMAGQIYRWVDAQGVTHFDQQPPQGQSSTAVKTPSSTAPKPAALPGSGALGDQKAIDDKVKKQVA EQQNQLKAFCEQARTNLAQLQNNPRLREEVEGELRRLNDEQRQQRTEEAKKQIAENCQ
Sequences:
>Translated_138_residues MRTLLLTLLISVSPWCMAGQIYRWVDAQGVTHFDQQPPQGQSSTAVKTPSSTAPKPAALPGSGALGDQKAIDDKVKKQVA EQQNQLKAFCEQARTNLAQLQNNPRLREEVEGELRRLNDEQRQQRTEEAKKQIAENCQ >Mature_138_residues MRTLLLTLLISVSPWCMAGQIYRWVDAQGVTHFDQQPPQGQSSTAVKTPSSTAPKPAALPGSGALGDQKAIDDKVKKQVA EQQNQLKAFCEQARTNLAQLQNNPRLREEVEGELRRLNDEQRQQRTEEAKKQIAENCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15425; Mature: 15425
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLLLTLLISVSPWCMAGQIYRWVDAQGVTHFDQQPPQGQSSTAVKTPSSTAPKPAALP CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC GSGALGDQKAIDDKVKKQVAEQQNQLKAFCEQARTNLAQLQNNPRLREEVEGELRRLNDE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH QRQQRTEEAKKQIAENCQ HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTLLLTLLISVSPWCMAGQIYRWVDAQGVTHFDQQPPQGQSSTAVKTPSSTAPKPAALP CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC GSGALGDQKAIDDKVKKQVAEQQNQLKAFCEQARTNLAQLQNNPRLREEVEGELRRLNDE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH QRQQRTEEAKKQIAENCQ HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA