| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460998
Identifier: 77460998
GI number: 77460998
Start: 5384422
End: 5385768
Strand: Direct
Name: 77460998
Synonym: Pfl01_4777
Alternate gene names: NA
Gene position: 5384422-5385768 (Clockwise)
Preceding gene: 77460995
Following gene: 77460999
Centisome position: 83.63
GC content: 63.85
Gene sequence:
>1347_bases GTGAATCGCATCCTTCGTGATGCAGTACAATCGCGGCTTTTAATCGCCAACCAGCCGGCCATTCCGATGATCGAACCCAA GCGCGTCTTGCGCGCCCTCGCTGAACACTGGGCACTTCTGGAGCCACTGTGCGAGCACTTCGACCAGGGCACCCTGAGCC TCAACGAACTGCGCACGCAACTGGCCGCCCAGCAACTGGACAGCACGCCGCAGGACATCACCAGCCTGCTCGACGTGTGG ATCCGTCTCGACATTCTGGTTCCCGTGGCGAAAAGCCCGAACCGTTTCGAGCTCAATGCGCAGATCCACGACTTCCTCGC CTACCTGCGCCGCGAGCACCGTCTGGGCCTGTGCCTGGAGATCGAAGCCTATCTGCGTCACCTCGAGCGTCTGGCCGGTT ATATCCAGGATGCGTTCGACGTCCGTGACGGCAATGATCTGGCGCGCCAGCTGCGCCTGCTCGACATGCGCGTGCGCGAC GTGCTGAAGAAACTCGACAACGACGAACAGGCGCTGGTGGCCGTGGCCGAGCGGGCCAAGACCAGCGACCGGCAGATTCC GCTGCGTCAGCGTTACGCCGAAGTACTGGCGACGTGGGACGAATACGTCGAGCCGATGATCGATCTGGTGAACGCCGACG GCGCTTTCGAGCAAGGTGTGCGCAAGGTCGAAACCGTATTGCTGAAGATGCTCAGCGAACAGCAGCGCCTCGGCCATCTG GTCGATGACGACATGCTGCTGCGCACCCACGCGCGCATCCTCGAAATGCAGACCAGTGCCCAGCTGACCTTGCGTCACGC TCGGGAATTGCTGCTGCCGCTGCGTGAAGAAGCCCGCCGGCACAACGCCGTGACCCGTGGCGCCGCCCTCGCCCTCGCCG CGATCCGCCGCAAAGGCATTGACGCGGTGCCACAAGCGGCGATGCCACTGTTCACCCGGCCGCAAAGCACCTTTCTCGGC AGCGCCAGTCAGGTCGAAGCCTACGTCTACGCCCTGGCCCGGTTCGAGCCGAAACCGGCGCGTTTCCCCAAGGCGCACAA ATCGCAGAAGACCGGCGATGCCCCGCGTGCCCCGCGCACCGTGCGTGAGATGGTCGACCGCTGCGAAGAATCCCTGCCGA TGCCGGACCTGATGACCTGGCTGCTGGAGCAGGAACCGGACGGCGCGACCGACGAATTGCTTTACTGGTTCTCGCGCCTG TCGCGGGAAAAACGCTTCAAGCGCGAGCGTCTGGAACGCCGCGAATACCACACTCACGAGCATCAGGTCAGCCTGCGCTC CTTCGCCCTGCTCTCGGCCGGCGATACCGCCGCCGAGGATTCTGCGAGCATCCCCAATGCATCTTGA
Upstream 100 bases:
>100_bases GTGCGCTGATTCTACCGCCCTTCGCTCAAGATCGCGCGCTGTTGATCGATAGTCTTGACCGATAGCTTGACGCAAAGAAA AGCGACAGCCCGTCCCGAGA
Downstream 100 bases:
>100_bases TCTATCCGAACTGTCTCAGCTGGCGCCGATCTTTCGCGAGCTGTTCAAGGGCTACCACGTCAGCCGTCGCGACCCGGAGC TGTACGCGCAACTGTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNRILRDAVQSRLLIANQPAIPMIEPKRVLRALAEHWALLEPLCEHFDQGTLSLNELRTQLAAQQLDSTPQDITSLLDVW IRLDILVPVAKSPNRFELNAQIHDFLAYLRREHRLGLCLEIEAYLRHLERLAGYIQDAFDVRDGNDLARQLRLLDMRVRD VLKKLDNDEQALVAVAERAKTSDRQIPLRQRYAEVLATWDEYVEPMIDLVNADGAFEQGVRKVETVLLKMLSEQQRLGHL VDDDMLLRTHARILEMQTSAQLTLRHARELLLPLREEARRHNAVTRGAALALAAIRRKGIDAVPQAAMPLFTRPQSTFLG SASQVEAYVYALARFEPKPARFPKAHKSQKTGDAPRAPRTVREMVDRCEESLPMPDLMTWLLEQEPDGATDELLYWFSRL SREKRFKRERLERREYHTHEHQVSLRSFALLSAGDTAAEDSASIPNAS
Sequences:
>Translated_448_residues MNRILRDAVQSRLLIANQPAIPMIEPKRVLRALAEHWALLEPLCEHFDQGTLSLNELRTQLAAQQLDSTPQDITSLLDVW IRLDILVPVAKSPNRFELNAQIHDFLAYLRREHRLGLCLEIEAYLRHLERLAGYIQDAFDVRDGNDLARQLRLLDMRVRD VLKKLDNDEQALVAVAERAKTSDRQIPLRQRYAEVLATWDEYVEPMIDLVNADGAFEQGVRKVETVLLKMLSEQQRLGHL VDDDMLLRTHARILEMQTSAQLTLRHARELLLPLREEARRHNAVTRGAALALAAIRRKGIDAVPQAAMPLFTRPQSTFLG SASQVEAYVYALARFEPKPARFPKAHKSQKTGDAPRAPRTVREMVDRCEESLPMPDLMTWLLEQEPDGATDELLYWFSRL SREKRFKRERLERREYHTHEHQVSLRSFALLSAGDTAAEDSASIPNAS >Mature_448_residues MNRILRDAVQSRLLIANQPAIPMIEPKRVLRALAEHWALLEPLCEHFDQGTLSLNELRTQLAAQQLDSTPQDITSLLDVW IRLDILVPVAKSPNRFELNAQIHDFLAYLRREHRLGLCLEIEAYLRHLERLAGYIQDAFDVRDGNDLARQLRLLDMRVRD VLKKLDNDEQALVAVAERAKTSDRQIPLRQRYAEVLATWDEYVEPMIDLVNADGAFEQGVRKVETVLLKMLSEQQRLGHL VDDDMLLRTHARILEMQTSAQLTLRHARELLLPLREEARRHNAVTRGAALALAAIRRKGIDAVPQAAMPLFTRPQSTFLG SASQVEAYVYALARFEPKPARFPKAHKSQKTGDAPRAPRTVREMVDRCEESLPMPDLMTWLLEQEPDGATDELLYWFSRL SREKRFKRERLERREYHTHEHQVSLRSFALLSAGDTAAEDSASIPNAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51396; Mature: 51396
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILRDAVQSRLLIANQPAIPMIEPKRVLRALAEHWALLEPLCEHFDQGTLSLNELRTQ CCHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LAAQQLDSTPQDITSLLDVWIRLDILVPVAKSPNRFELNAQIHDFLAYLRREHRLGLCLE HHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEE IEAYLRHLERLAGYIQDAFDVRDGNDLARQLRLLDMRVRDVLKKLDNDEQALVAVAERAK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC TSDRQIPLRQRYAEVLATWDEYVEPMIDLVNADGAFEQGVRKVETVLLKMLSEQQRLGHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VDDDMLLRTHARILEMQTSAQLTLRHARELLLPLREEARRHNAVTRGAALALAAIRRKGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAVPQAAMPLFTRPQSTFLGSASQVEAYVYALARFEPKPARFPKAHKSQKTGDAPRAPRT CCCCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCHH VREMVDRCEESLPMPDLMTWLLEQEPDGATDELLYWFSRLSREKRFKRERLERREYHTHE HHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQVSLRSFALLSAGDTAAEDSASIPNAS HHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRILRDAVQSRLLIANQPAIPMIEPKRVLRALAEHWALLEPLCEHFDQGTLSLNELRTQ CCHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LAAQQLDSTPQDITSLLDVWIRLDILVPVAKSPNRFELNAQIHDFLAYLRREHRLGLCLE HHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEE IEAYLRHLERLAGYIQDAFDVRDGNDLARQLRLLDMRVRDVLKKLDNDEQALVAVAERAK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC TSDRQIPLRQRYAEVLATWDEYVEPMIDLVNADGAFEQGVRKVETVLLKMLSEQQRLGHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VDDDMLLRTHARILEMQTSAQLTLRHARELLLPLREEARRHNAVTRGAALALAAIRRKGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAVPQAAMPLFTRPQSTFLGSASQVEAYVYALARFEPKPARFPKAHKSQKTGDAPRAPRT CCCCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCHH VREMVDRCEESLPMPDLMTWLLEQEPDGATDELLYWFSRLSREKRFKRERLERREYHTHE HHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQVSLRSFALLSAGDTAAEDSASIPNAS HHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA