| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460999
Identifier: 77460999
GI number: 77460999
Start: 5385758
End: 5386459
Strand: Direct
Name: 77460999
Synonym: Pfl01_4778
Alternate gene names: NA
Gene position: 5385758-5386459 (Clockwise)
Preceding gene: 77460998
Following gene: 77461000
Centisome position: 83.65
GC content: 61.68
Gene sequence:
>702_bases ATGCATCTTGATCTATCCGAACTGTCTCAGCTGGCGCCGATCTTTCGCGAGCTGTTCAAGGGCTACCACGTCAGCCGTCG CGACCCGGAGCTGTACGCGCAACTGTCGAACTTCCAGGACCAGTACCGCACGCTGTTCAAGGCGCTGGGCTTCGAACTGG TCTGCGACACCCGTGGTTTCTACTACTTCGTGCCGGACATGGCCGCAGCGGCGGTGAACAAGACCGCTCAGCGCCTGGCG CTGTTCACTTTCATCCTGGTCGAGCATCTGGCCGATCAGGGCCGCGACCCGATCGCCGTGCTCGACGGCGGCAGCCTCGG CCGTGAAGAACTGCCGTCGCTGCTGGAAAAGTACCGCGACCTGTTCATCCAGGCCGAAGTGCAGACCGTCGAAGAACTCG AAGAAAAAATCATGCGCCGCATGACCCAGCTCGGTTTCGCCAGCGAGGAAAACGGTGTGTACCGTTTCCTGCCGCCGATG CACCGGTTCCTCGACGTCTGCCTGTCGGTCCAGCAGGACCGCGATCTGGCGGCCAGCGTGCACAGCGTTCTGCCGCTGCC GGCACCGGTACTGATCGACGAAGAGGCCGAGGCCAAATTCCTCGCCACCGACGACCCGCTCGATCTTTCCGAATTTGAGG AAGAAAGCGAAGAAGACGCACTGGCCCGCGCCATTGCCGAAGAACAGGAGTCCGACGCATGA
Upstream 100 bases:
>100_bases CGCCGCGAATACCACACTCACGAGCATCAGGTCAGCCTGCGCTCCTTCGCCCTGCTCTCGGCCGGCGATACCGCCGCCGA GGATTCTGCGAGCATCCCCA
Downstream 100 bases:
>100_bases GCCAGGAACGCTACGGCATCCGCCGCTTTGCCCTTTTGAACACCGCCGGTTACAGCCTTGGCCTGTTCCCGCTGGAAGAA CCGCTGTCGGTCTACGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MHLDLSELSQLAPIFRELFKGYHVSRRDPELYAQLSNFQDQYRTLFKALGFELVCDTRGFYYFVPDMAAAAVNKTAQRLA LFTFILVEHLADQGRDPIAVLDGGSLGREELPSLLEKYRDLFIQAEVQTVEELEEKIMRRMTQLGFASEENGVYRFLPPM HRFLDVCLSVQQDRDLAASVHSVLPLPAPVLIDEEAEAKFLATDDPLDLSEFEEESEEDALARAIAEEQESDA
Sequences:
>Translated_233_residues MHLDLSELSQLAPIFRELFKGYHVSRRDPELYAQLSNFQDQYRTLFKALGFELVCDTRGFYYFVPDMAAAAVNKTAQRLA LFTFILVEHLADQGRDPIAVLDGGSLGREELPSLLEKYRDLFIQAEVQTVEELEEKIMRRMTQLGFASEENGVYRFLPPM HRFLDVCLSVQQDRDLAASVHSVLPLPAPVLIDEEAEAKFLATDDPLDLSEFEEESEEDALARAIAEEQESDA >Mature_233_residues MHLDLSELSQLAPIFRELFKGYHVSRRDPELYAQLSNFQDQYRTLFKALGFELVCDTRGFYYFVPDMAAAAVNKTAQRLA LFTFILVEHLADQGRDPIAVLDGGSLGREELPSLLEKYRDLFIQAEVQTVEELEEKIMRRMTQLGFASEENGVYRFLPPM HRFLDVCLSVQQDRDLAASVHSVLPLPAPVLIDEEAEAKFLATDDPLDLSEFEEESEEDALARAIAEEQESDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26507; Mature: 26507
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLDLSELSQLAPIFRELFKGYHVSRRDPELYAQLSNFQDQYRTLFKALGFELVCDTRGF CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC YYFVPDMAAAAVNKTAQRLALFTFILVEHLADQGRDPIAVLDGGSLGREELPSLLEKYRD EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHH LFIQAEVQTVEELEEKIMRRMTQLGFASEENGVYRFLPPMHRFLDVCLSVQQDRDLAASV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH HSVLPLPAPVLIDEEAEAKFLATDDPLDLSEFEEESEEDALARAIAEEQESDA HHHCCCCCCEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHLDLSELSQLAPIFRELFKGYHVSRRDPELYAQLSNFQDQYRTLFKALGFELVCDTRGF CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC YYFVPDMAAAAVNKTAQRLALFTFILVEHLADQGRDPIAVLDGGSLGREELPSLLEKYRD EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHH LFIQAEVQTVEELEEKIMRRMTQLGFASEENGVYRFLPPMHRFLDVCLSVQQDRDLAASV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH HSVLPLPAPVLIDEEAEAKFLATDDPLDLSEFEEESEEDALARAIAEEQESDA HHHCCCCCCEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA