| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460995
Identifier: 77460995
GI number: 77460995
Start: 5382645
End: 5383049
Strand: Direct
Name: 77460995
Synonym: Pfl01_4774
Alternate gene names: NA
Gene position: 5382645-5383049 (Clockwise)
Preceding gene: 77460993
Following gene: 77460998
Centisome position: 83.6
GC content: 62.47
Gene sequence:
>405_bases ATGACTGATTCACGACGTCCCTTCGATGCGGTGCAACCGGAGCCCATCGATGATAACGAAGACCGCATGGGGTCGGTGCA CGAGCTGGATTTCGACGATGAAGAGCCCAGTGCGAAGATCGGCGATGAACTGCCTGAACGCGAGCGCGAACAGTTGATGC CACGCGAGCGCGTGCGCGAAGCCGGTTTGACTGGGGCATCGACCGCCGATCATGAGCCTACCGACGACGACCTTAGCCCG GAAACCCTGATCCGTGAGGACGGTGCCCGGGATGCTCGGGAACTCGGTGAAGGCAATCAGGCCGATTGGGATTTGAGCGT GGTCGACGGCAACGACATCGGCGGCGGCAACGGGCTGGATGAAGCGGAACTGGCGCGCCGCGATCCGCTGGATCGCAAGC GCTGA
Upstream 100 bases:
>100_bases CCGCCCGTCGGGGTCACGCACGGATCGCTGGTGATTTGCTTTGAATTCTCGCGCGCCCGGTGAGTCCACCTCAGTAAGGC CCACAGTATGAGGAATTGCC
Downstream 100 bases:
>100_bases GGACACCTGCCGCGATCAGTCGACGAGCGTGCAGGCCATGACCACGGCATCTTCACGCCCGCCGACCGCCGGGTAGTAAT CCCGGCGCCGGCCGATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTDSRRPFDAVQPEPIDDNEDRMGSVHELDFDDEEPSAKIGDELPEREREQLMPRERVREAGLTGASTADHEPTDDDLSP ETLIREDGARDARELGEGNQADWDLSVVDGNDIGGGNGLDEAELARRDPLDRKR
Sequences:
>Translated_134_residues MTDSRRPFDAVQPEPIDDNEDRMGSVHELDFDDEEPSAKIGDELPEREREQLMPRERVREAGLTGASTADHEPTDDDLSP ETLIREDGARDARELGEGNQADWDLSVVDGNDIGGGNGLDEAELARRDPLDRKR >Mature_133_residues TDSRRPFDAVQPEPIDDNEDRMGSVHELDFDDEEPSAKIGDELPEREREQLMPRERVREAGLTGASTADHEPTDDDLSPE TLIREDGARDARELGEGNQADWDLSVVDGNDIGGGNGLDEAELARRDPLDRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14953; Mature: 14822
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSRRPFDAVQPEPIDDNEDRMGSVHELDFDDEEPSAKIGDELPEREREQLMPRERVRE CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCHHHHHHCCCHHHHHH AGLTGASTADHEPTDDDLSPETLIREDGARDARELGEGNQADWDLSVVDGNDIGGGNGLD HCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC EAELARRDPLDRKR HHHHHHCCCCCCCC >Mature Secondary Structure TDSRRPFDAVQPEPIDDNEDRMGSVHELDFDDEEPSAKIGDELPEREREQLMPRERVRE CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCHHHHHHCCCHHHHHH AGLTGASTADHEPTDDDLSPETLIREDGARDARELGEGNQADWDLSVVDGNDIGGGNGLD HCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC EAELARRDPLDRKR HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA