| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460993
Identifier: 77460993
GI number: 77460993
Start: 5381230
End: 5381850
Strand: Direct
Name: 77460993
Synonym: Pfl01_4772
Alternate gene names: NA
Gene position: 5381230-5381850 (Clockwise)
Preceding gene: 77460992
Following gene: 77460995
Centisome position: 83.58
GC content: 57.65
Gene sequence:
>621_bases GTGATTTACGGGATCTTGGATCCAATCAATCGTGTTGCAGGACTGACAGGACGTCAGCCGAGGGATGTCGCGACACCGAA TCCAACAGGGATCGTTATGAACACTTACGCACTACCGGGTAAAGCGGCACGCGATACCGAGGGCATTTATCCTTTTGCCG GACTCCCTGTGCGCCTGGGATTTCCGTCAAAACAGGATTTCGAGATTGTTCACGATCCCGACGGCGTGGCCACCGCTGTC ATAGCGTGCCGGGCATTCATGCGCATCACCCGAATGTGCCGGGTTTCAGGCCAGTTGCTGCCCTATCGCTGCCGGCAGAC CCGGCAATTGCTGGCCGGCATCCATCTTTACGATCCGCGCTTTTGCGGCGCGTTCGAGCATTGTTGCGACCCGAACACCT TTCTCGACATGAGCGAATTATGGGTATGGGCCCTACGCGACATTGTGGAGGGTGAAAGGCTGACCATTGATTACACCGCC ACCGAAGACAAACTGCTGCGGCAGTTCGCCTGCGGTTGCGGGTCCTCGCGCTGCCGCGGGTGGATCACCGGTTACGACGA ATCACCCAATCTTGAAGGCCAGCGCTATTTGCTCAGCTGGCGGCGACAAGGTTTACGCTGA
Upstream 100 bases:
>100_bases CCGCCCACCTCTGAACGAACGTGCGACGCTCCCGTGTCAGCCTCGGCTGACTCGGGAAAGCGTCTATTTCGCCTGTCAGA TCTGACAGTAGACCGCTAGT
Downstream 100 bases:
>100_bases ACGACCGGTCAAGGCGCGCCGACCGGACGCAAGCGGTACTGCGGCGGTAATTGCTCGAAACCGCTGATCGTGGTGTTCAG GCTCTTCCAGCGACCATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIYGILDPINRVAGLTGRQPRDVATPNPTGIVMNTYALPGKAARDTEGIYPFAGLPVRLGFPSKQDFEIVHDPDGVATAV IACRAFMRITRMCRVSGQLLPYRCRQTRQLLAGIHLYDPRFCGAFEHCCDPNTFLDMSELWVWALRDIVEGERLTIDYTA TEDKLLRQFACGCGSSRCRGWITGYDESPNLEGQRYLLSWRRQGLR
Sequences:
>Translated_206_residues MIYGILDPINRVAGLTGRQPRDVATPNPTGIVMNTYALPGKAARDTEGIYPFAGLPVRLGFPSKQDFEIVHDPDGVATAV IACRAFMRITRMCRVSGQLLPYRCRQTRQLLAGIHLYDPRFCGAFEHCCDPNTFLDMSELWVWALRDIVEGERLTIDYTA TEDKLLRQFACGCGSSRCRGWITGYDESPNLEGQRYLLSWRRQGLR >Mature_206_residues MIYGILDPINRVAGLTGRQPRDVATPNPTGIVMNTYALPGKAARDTEGIYPFAGLPVRLGFPSKQDFEIVHDPDGVATAV IACRAFMRITRMCRVSGQLLPYRCRQTRQLLAGIHLYDPRFCGAFEHCCDPNTFLDMSELWVWALRDIVEGERLTIDYTA TEDKLLRQFACGCGSSRCRGWITGYDESPNLEGQRYLLSWRRQGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23265; Mature: 23265
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS50280 SET ; PS50868 POST_SET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYGILDPINRVAGLTGRQPRDVATPNPTGIVMNTYALPGKAARDTEGIYPFAGLPVRLG CCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEC FPSKQDFEIVHDPDGVATAVIACRAFMRITRMCRVSGQLLPYRCRQTRQLLAGIHLYDPR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC FCGAFEHCCDPNTFLDMSELWVWALRDIVEGERLTIDYTATEDKLLRQFACGCGSSRCRG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCE WITGYDESPNLEGQRYLLSWRRQGLR EECCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MIYGILDPINRVAGLTGRQPRDVATPNPTGIVMNTYALPGKAARDTEGIYPFAGLPVRLG CCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEC FPSKQDFEIVHDPDGVATAVIACRAFMRITRMCRVSGQLLPYRCRQTRQLLAGIHLYDPR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC FCGAFEHCCDPNTFLDMSELWVWALRDIVEGERLTIDYTATEDKLLRQFACGCGSSRCRG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCE WITGYDESPNLEGQRYLLSWRRQGLR EECCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA