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The map label for this gene is atoE [H]

Identifier: 77460989

GI number: 77460989

Start: 5374867

End: 5376285

Strand: Direct

Name: atoE [H]

Synonym: Pfl01_4768

Alternate gene names: 77460989

Gene position: 5374867-5376285 (Clockwise)

Preceding gene: 77460985

Following gene: 77460990

Centisome position: 83.48

GC content: 63.71

Gene sequence:

>1419_bases
GTGGCCGTTGATATCGAAGATAGCCGCTCTGCGCGCTTTGCCTTGCGCTGTTCAAGTTTCGCCGAACGCTGGTTTCCCGA
CTCCTGGGTGTTCGCCGCACTGGCGGTGATCATCGTCGCGCTGGCGACCCTGGCCATGGGCGCCAAACCCACCGACGCCG
CCATGGCGTTCGGGGACGGATTCTGGAGCCTGATCCCGTTCACCATGCAGATGGCGTTCGTGGTGATCGGTGGTTATGTC
GTGGCCAGTTCGCCGCCCGCCGTGAAACTGATCGATCGCCTGGCGCGGATCCCGAAGAACGGTCGCTCTGCCGTGGCGTG
GGTCGCGCTGATCTCGATGGTCGCGTCCTTGCTCAACTGGGGCCTGTCGCTGGTGTTCGGCGGTCTGCTGGTTCGCGCCC
TCGCCCGCCGCACCGATCTGAAAATGGACTATCGCGCCGCCGGTGCCGCCGCCTACCTTGGCCTCGGCGCCGTGTGGGCA
CTGGGACTGTCGTCGTCCGCCGCGCAGTTGCAGGCCAACCCGGCCAGCCTGCCGCCGTCGATCCTGTCGATCACCGGGGT
GATTCCGTTCACCCAGACGATTTTCCTCTGGCAGTCGGGCGTGATGCTGCTGGCGCTGATCGTGATTTCGATCATCATCG
CCTACGCCACCGCGCCCGGCCCGAACTCGGCGCGTGACGCCAAGGCCTGCGGCATCGACCCGGCCTTCAACCTGCCACCG
CTGCAACCGCGCACCCGCCCTGGCGAATGGCTGGAACACAGCCCGCTGCTGATCATCCTGCTGGTGCTGCTGGCGGCCGG
ATGGCTGTTCCACGAGTTTTCGACCAAACCTGCGATCACCGCGATTTCCGGGCTCAACACCTACAACTTCCTGTTCATCA
TGCTCGGCGCGTTGCTGCACTGGCGCCCGCGCAGTTTCCTCGATGCGGTGTCGCGCGCCGTGCCGACCACCACCGGGGTA
CTGATCCAGTTCCCGCTGTACGGCTCGATTGCCGCGCTGATGACCACGGTCAAGGGCACCGACGCCCAGACCCTGGCCCA
TCACATCTCGACGTTCTTCGTAAGCATCGCTTCCCACGACACCTATGCGTTGCTGATGGGTGTGTACTCGGCGATTCTCG
GTTTCTTCATTCCGTCCGGCGGCGGCAAATGGATCATCGAGGCGCCGTACGTAATGCAGGTGGCCAACGATCTCAACTAT
CACCTCGGCTGGGCGGTGCAGATCTACAACGCCGCAGAAGCCCTGCCGAATCTGATCAACCCGTTTTATATGCTGCCGCT
GCTGGGCGTGCTGGGGCTCAAGGCGCGGGATCTGATCGGTTTTTCGTTCGTGCAATTACTGGTGCACACGCCGCTGGTAT
TGGTGCTGCTGTGGGCTCTGGGTACGACGCTGTCGTATCTGCCGCCCGTCATGCCCTAA

Upstream 100 bases:

>100_bases
GGTCACAAAAATCCGCCGGTTGATTTACTGTTGGCAGCTGTCCAGACGGGCCGGCCAGGCCCCGAAGACCACAATAAACA
TAAAAATCCGAGGTACTCCC

Downstream 100 bases:

>100_bases
ACGATGTCTACAGGGCGCCGGCTCTGGCGCCCTGTCTTTCCCATCGACAAAATCGCCCCGAACGATCCCTCCTGCGGCTG
CCTGTCGCAAATAATGGCTC

Product: Short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAVDIEDSRSARFALRCSSFAERWFPDSWVFAALAVIIVALATLAMGAKPTDAAMAFGDGFWSLIPFTMQMAFVVIGGYV
VASSPPAVKLIDRLARIPKNGRSAVAWVALISMVASLLNWGLSLVFGGLLVRALARRTDLKMDYRAAGAAAYLGLGAVWA
LGLSSSAAQLQANPASLPPSILSITGVIPFTQTIFLWQSGVMLLALIVISIIIAYATAPGPNSARDAKACGIDPAFNLPP
LQPRTRPGEWLEHSPLLIILLVLLAAGWLFHEFSTKPAITAISGLNTYNFLFIMLGALLHWRPRSFLDAVSRAVPTTTGV
LIQFPLYGSIAALMTTVKGTDAQTLAHHISTFFVSIASHDTYALLMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLNY
HLGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLVLLWALGTTLSYLPPVMP

Sequences:

>Translated_472_residues
MAVDIEDSRSARFALRCSSFAERWFPDSWVFAALAVIIVALATLAMGAKPTDAAMAFGDGFWSLIPFTMQMAFVVIGGYV
VASSPPAVKLIDRLARIPKNGRSAVAWVALISMVASLLNWGLSLVFGGLLVRALARRTDLKMDYRAAGAAAYLGLGAVWA
LGLSSSAAQLQANPASLPPSILSITGVIPFTQTIFLWQSGVMLLALIVISIIIAYATAPGPNSARDAKACGIDPAFNLPP
LQPRTRPGEWLEHSPLLIILLVLLAAGWLFHEFSTKPAITAISGLNTYNFLFIMLGALLHWRPRSFLDAVSRAVPTTTGV
LIQFPLYGSIAALMTTVKGTDAQTLAHHISTFFVSIASHDTYALLMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLNY
HLGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLVLLWALGTTLSYLPPVMP
>Mature_471_residues
AVDIEDSRSARFALRCSSFAERWFPDSWVFAALAVIIVALATLAMGAKPTDAAMAFGDGFWSLIPFTMQMAFVVIGGYVV
ASSPPAVKLIDRLARIPKNGRSAVAWVALISMVASLLNWGLSLVFGGLLVRALARRTDLKMDYRAAGAAAYLGLGAVWAL
GLSSSAAQLQANPASLPPSILSITGVIPFTQTIFLWQSGVMLLALIVISIIIAYATAPGPNSARDAKACGIDPAFNLPPL
QPRTRPGEWLEHSPLLIILLVLLAAGWLFHEFSTKPAITAISGLNTYNFLFIMLGALLHWRPRSFLDAVSRAVPTTTGVL
IQFPLYGSIAALMTTVKGTDAQTLAHHISTFFVSIASHDTYALLMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLNYH
LGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLVLLWALGTTLSYLPPVMP

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=444, Percent_Identity=33.5585585585586, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 50738; Mature: 50606

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDIEDSRSARFALRCSSFAERWFPDSWVFAALAVIIVALATLAMGAKPTDAAMAFGDG
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
FWSLIPFTMQMAFVVIGGYVVASSPPAVKLIDRLARIPKNGRSAVAWVALISMVASLLNW
HHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GLSLVFGGLLVRALARRTDLKMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHH
ILSITGVIPFTQTIFLWQSGVMLLALIVISIIIAYATAPGPNSARDAKACGIDPAFNLPP
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC
LQPRTRPGEWLEHSPLLIILLVLLAAGWLFHEFSTKPAITAISGLNTYNFLFIMLGALLH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH
WRPRSFLDAVSRAVPTTTGVLIQFPLYGSIAALMTTVKGTDAQTLAHHISTFFVSIASHD
CCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
TYALLMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLNYHLGWAVQIYNAAEALPNLIN
HHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHH
PFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLVLLWALGTTLSYLPPVMP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AVDIEDSRSARFALRCSSFAERWFPDSWVFAALAVIIVALATLAMGAKPTDAAMAFGDG
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
FWSLIPFTMQMAFVVIGGYVVASSPPAVKLIDRLARIPKNGRSAVAWVALISMVASLLNW
HHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GLSLVFGGLLVRALARRTDLKMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHH
ILSITGVIPFTQTIFLWQSGVMLLALIVISIIIAYATAPGPNSARDAKACGIDPAFNLPP
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC
LQPRTRPGEWLEHSPLLIILLVLLAAGWLFHEFSTKPAITAISGLNTYNFLFIMLGALLH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH
WRPRSFLDAVSRAVPTTTGVLIQFPLYGSIAALMTTVKGTDAQTLAHHISTFFVSIASHD
CCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
TYALLMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLNYHLGWAVQIYNAAEALPNLIN
HHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHH
PFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLVLLWALGTTLSYLPPVMP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]