| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is imm [H]
Identifier: 77460983
GI number: 77460983
Start: 5367736
End: 5367990
Strand: Direct
Name: imm [H]
Synonym: Pfl01_4762
Alternate gene names: 77460983
Gene position: 5367736-5367990 (Clockwise)
Preceding gene: 77460982
Following gene: 77460985
Centisome position: 83.37
GC content: 46.67
Gene sequence:
>255_bases ATGAAAAAAACCATTTCTGACTACACAGAAGCTGAGTTCATTGAGTTTCTGAAATCCGTGCTGGCGGCCAATACAAGTCC CGATGAAATACTTGATCCGTTACTTTTTGAGTTTGAACGTCTCAGTGAGCACCCGGCAGGATCTGACTTGATTTATTGGC CGGAGGATTTGAGCAAAAGAGTGACAGCCGAAGGCATCACAGAAACGGTGAAAGAGTGGCGTGCTGCCAACGGCCTACCT GGTTTCAAGCAGTAA
Upstream 100 bases:
>100_bases ACGTCGAGCATATTGCCAATAACGGCGCGGTATACGACATAGACAACTTGCGAGTGAACACTCCAAAAAATCACGTTGAA AACCACCGAAGTGGATAGCC
Downstream 100 bases:
>100_bases ACATCTGGAATCCATACTCCAAACAGCTAAAACGGCTTACCGAAAGGCAAGCCGTTTGTTTATACCTCTTCCCCCAAGGC CAAGAGCCCCTTCGCCCAAA
Product: colicin immunity protein/pyocin immunity protein
Products: NA
Alternate protein names: ImmE2; Microcin-E2 immunity protein [H]
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKKTISDYTEAEFIEFLKSVLAANTSPDEILDPLLFEFERLSEHPAGSDLIYWPEDLSKRVTAEGITETVKEWRAANGLP GFKQ
Sequences:
>Translated_84_residues MKKTISDYTEAEFIEFLKSVLAANTSPDEILDPLLFEFERLSEHPAGSDLIYWPEDLSKRVTAEGITETVKEWRAANGLP GFKQ >Mature_84_residues MKKTISDYTEAEFIEFLKSVLAANTSPDEILDPLLFEFERLSEHPAGSDLIYWPEDLSKRVTAEGITETVKEWRAANGLP GFKQ
Specific function: This protein is able to protect a cell, which harbors the plasmid ColE2 encoding colicin E2, against colicin E2 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the colicins ColE2/ColE8/ColE9 and pyocins S1/S2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000290 - ProDom: PD007225 [H]
Pfam domain/function: PF01320 Colicin_Pyocin [H]
EC number: NA
Molecular weight: Translated: 9533; Mature: 9533
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTISDYTEAEFIEFLKSVLAANTSPDEILDPLLFEFERLSEHPAGSDLIYWPEDLSKR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHH VTAEGITETVKEWRAANGLPGFKQ HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKTISDYTEAEFIEFLKSVLAANTSPDEILDPLLFEFERLSEHPAGSDLIYWPEDLSKR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHH VTAEGITETVKEWRAANGLPGFKQ HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6095211; 2987833; 3892228 [H]