| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460929
Identifier: 77460929
GI number: 77460929
Start: 5314848
End: 5316737
Strand: Reverse
Name: 77460929
Synonym: Pfl01_4708
Alternate gene names: NA
Gene position: 5316737-5314848 (Counterclockwise)
Preceding gene: 77460930
Following gene: 77460928
Centisome position: 82.58
GC content: 61.59
Gene sequence:
>1890_bases ATGACCTCAGTAAACCAGTTCTGGCGCCGGGCAAAGCTGCCTCTGGCCGTCAGTCTTGCTTCTTCGCTCGCCGGGCCCGC ATTCGGCGTCAGTTTCAACGTCGGTGAAATCGAAGGCCAGTTCGACTCCTCCCTGTCGATCGGTGCCAGCTGGTCCACCC AGAGCCCGAACAAGAACCTCATCGGCGTCAACAACGGCGGTCACGGTCTGTCCCAGACTTCCGACGACGGCCATGCCAAC TTCAAGAGCGGCGAAACGTTCTCGAAGATCTTCAAGGGCATCCATGACCTCGAACTGAAATACGGCGACACCGGCGTATT CGTCCGAGGCAAGTACTGGTACGACTTCGAACTGAAGGACGAGAGCCGCGAGTTCAAGGACATCAGCGACAGCAACCGCA AGGAAGGCGCCAAGTCCGCCGGCGGTCAGATCCTCGATGCCTTCGTTTACCACAACTACGCGATTGCCGATCAGCCGGGC TCCGTGCGTCTGGGCAAGCAGGTGGTGAGCTGGGGTGAAAGTACCTTCATCGGCGGCGGCATCAACTCGATCAACCCGAT CGACGTGTCTGCGTTTCGTCGTCCGGGCGCCGAGATCAAGGAAGGCCTGATCCCGGTCAACATGTTCTACGTGTCCCAGA GCCTGACCGACAACCTGTCCGCCGAAGCGTTCTATCAGCTTGAGTGGGACCAGACCGTCGTCGACAACTGCGGCACCTTC TTCTCCCAGCCGGACATCATTGCCGACGGTTGCGACAGCAACCTGCGCGTGCTGAACAAGCGTTCGACGATTCCTGCCAT TGCTTTGGGGCCATTGGCGGCCAACGGTGTGGACGTCAACCAGGAAGGCGTACTGGTGCGTCGCGGAGGCGATCGCGATG CACGGGACAGCGGCCAGTGGGGCGCGTCCTTCAAATACATGTTCGACCCGCTCGATACCGAGTTCGGCGCGTACTTCATG AACTACCACAGCCGTGCGCCGATCTTCAGCGCTACGGGGGCGCCACAGTCGGTCTACAACACCGCCAGGGGATTGCCGGG GCCGTTCGCTGCGCTTGCACCACTGCTGGTGGCCGGCAATTCGCAGTACTTCGTTGAATACCCTGAAGACATTCGCCTGT ATGGCCTGAGCTTCTCCACCACCCTGCCTACCGGTACGGCTTGGAGTGGCGAAATCAGCTACCGTCCGAACGCGCCGGTG CAACTGAATTCCACCGACATCCTGTTTGCCGGTGTACGTCCGCTGGGTGGTGCATTGTCCAATGCTTCGCTGCTGACCGG TGTGCCTGGCCAGGACCTGCACGGTTACCGTCGCAAGGAGATCACCCAGTTCCAGACCACCCTGACGCACTTCTTCGATC AGGTCATGGGCGCCAGCCGTCTGACCCTGGTGGGCGAAGTGGGTGTGACTCACGTCGGCGGCCTGGAAAGCACCTCCGAC GTCCGTTACGGCCGTGACCCGGTCTACGGTCCGGGCGAGTTGCCGGCCACGGGCGGTGCCAACACCTGCGCCAACATCCT CAACGCCAGCACCATCAATGGTGCGGGTCCCGGCTCGCCGCAGAACAACCGCAGCCGCAACTGCACCGACGAAGGCTTCA CCACCTCGACTTCGTGGGGCTATCGCGGTCGCGCCATCTGGGAATACAACGACGTGTTCGCCGGCGTGAACCTCAAGCCG AACGTGGCCTGGTCCCACGACGTCAGCGGCTACTCGCCAGGCCCTGGCGGCAACTTCGAAGAAGGTCGCAAGGCGGTGAG CCTGGGCGTCGATGCCGAGTACCAGAACACCTACACCGCGAGTCTGGCCTACACCAACTTCTTCGACGGCAAGTACACCA CCGTGGATGACCGCGACTTCGTGGCGCTCAGCTTCGGCGTGAACTTCTAA
Upstream 100 bases:
>100_bases GCAACATTGAAGCGATTTCGGGAAGCCTCTGGCACCCGGTCCTTCAGGCGTTTTTAAAAGTACTCACTGCCATAACAATA ATGCACATGGAGTAGCGTCG
Downstream 100 bases:
>100_bases GCACTGCATTTCAGGACGAACGAATTTATGAAAATAACAAAGAGTCTGTTCCACGCCGGTGTTCTGGGCCTGTCGCTGCT GGCGACCGGTGTCATGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MTSVNQFWRRAKLPLAVSLASSLAGPAFGVSFNVGEIEGQFDSSLSIGASWSTQSPNKNLIGVNNGGHGLSQTSDDGHAN FKSGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKDESREFKDISDSNRKEGAKSAGGQILDAFVYHNYAIADQPG SVRLGKQVVSWGESTFIGGGINSINPIDVSAFRRPGAEIKEGLIPVNMFYVSQSLTDNLSAEAFYQLEWDQTVVDNCGTF FSQPDIIADGCDSNLRVLNKRSTIPAIALGPLAANGVDVNQEGVLVRRGGDRDARDSGQWGASFKYMFDPLDTEFGAYFM NYHSRAPIFSATGAPQSVYNTARGLPGPFAALAPLLVAGNSQYFVEYPEDIRLYGLSFSTTLPTGTAWSGEISYRPNAPV QLNSTDILFAGVRPLGGALSNASLLTGVPGQDLHGYRRKEITQFQTTLTHFFDQVMGASRLTLVGEVGVTHVGGLESTSD VRYGRDPVYGPGELPATGGANTCANILNASTINGAGPGSPQNNRSRNCTDEGFTTSTSWGYRGRAIWEYNDVFAGVNLKP NVAWSHDVSGYSPGPGGNFEEGRKAVSLGVDAEYQNTYTASLAYTNFFDGKYTTVDDRDFVALSFGVNF
Sequences:
>Translated_629_residues MTSVNQFWRRAKLPLAVSLASSLAGPAFGVSFNVGEIEGQFDSSLSIGASWSTQSPNKNLIGVNNGGHGLSQTSDDGHAN FKSGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKDESREFKDISDSNRKEGAKSAGGQILDAFVYHNYAIADQPG SVRLGKQVVSWGESTFIGGGINSINPIDVSAFRRPGAEIKEGLIPVNMFYVSQSLTDNLSAEAFYQLEWDQTVVDNCGTF FSQPDIIADGCDSNLRVLNKRSTIPAIALGPLAANGVDVNQEGVLVRRGGDRDARDSGQWGASFKYMFDPLDTEFGAYFM NYHSRAPIFSATGAPQSVYNTARGLPGPFAALAPLLVAGNSQYFVEYPEDIRLYGLSFSTTLPTGTAWSGEISYRPNAPV QLNSTDILFAGVRPLGGALSNASLLTGVPGQDLHGYRRKEITQFQTTLTHFFDQVMGASRLTLVGEVGVTHVGGLESTSD VRYGRDPVYGPGELPATGGANTCANILNASTINGAGPGSPQNNRSRNCTDEGFTTSTSWGYRGRAIWEYNDVFAGVNLKP NVAWSHDVSGYSPGPGGNFEEGRKAVSLGVDAEYQNTYTASLAYTNFFDGKYTTVDDRDFVALSFGVNF >Mature_628_residues TSVNQFWRRAKLPLAVSLASSLAGPAFGVSFNVGEIEGQFDSSLSIGASWSTQSPNKNLIGVNNGGHGLSQTSDDGHANF KSGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKDESREFKDISDSNRKEGAKSAGGQILDAFVYHNYAIADQPGS VRLGKQVVSWGESTFIGGGINSINPIDVSAFRRPGAEIKEGLIPVNMFYVSQSLTDNLSAEAFYQLEWDQTVVDNCGTFF SQPDIIADGCDSNLRVLNKRSTIPAIALGPLAANGVDVNQEGVLVRRGGDRDARDSGQWGASFKYMFDPLDTEFGAYFMN YHSRAPIFSATGAPQSVYNTARGLPGPFAALAPLLVAGNSQYFVEYPEDIRLYGLSFSTTLPTGTAWSGEISYRPNAPVQ LNSTDILFAGVRPLGGALSNASLLTGVPGQDLHGYRRKEITQFQTTLTHFFDQVMGASRLTLVGEVGVTHVGGLESTSDV RYGRDPVYGPGELPATGGANTCANILNASTINGAGPGSPQNNRSRNCTDEGFTTSTSWGYRGRAIWEYNDVFAGVNLKPN VAWSHDVSGYSPGPGGNFEEGRKAVSLGVDAEYQNTYTASLAYTNFFDGKYTTVDDRDFVALSFGVNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67820; Mature: 67688
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVNQFWRRAKLPLAVSLASSLAGPAFGVSFNVGEIEGQFDSSLSIGASWSTQSPNKNL CCCHHHHHHHHCCCEEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCE IGVNNGGHGLSQTSDDGHANFKSGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKD EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEEECC ESREFKDISDSNRKEGAKSAGGQILDAFVYHNYAIADQPGSVRLGKQVVSWGESTFIGGG CCCHHHCCCCCCHHCCHHHCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCEEECCC INSINPIDVSAFRRPGAEIKEGLIPVNMFYVSQSLTDNLSAEAFYQLEWDQTVVDNCGTF CCCCCCCCHHHHCCCCHHHHHCCCEEEEEEEEHHHHCCCCCEEEEEEECCHHHHHHHHHH FSQPDIIADGCDSNLRVLNKRSTIPAIALGPLAANGVDVNQEGVLVRRGGDRDARDSGQW CCCCCEEECCCCCCEEEEECCCCCCEEEECCEECCCCCCCCCCEEEEECCCCCCCCCCCC GASFKYMFDPLDTEFGAYFMNYHSRAPIFSATGAPQSVYNTARGLPGPFAALAPLLVAGN CCEEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHEEECC SQYFVEYPEDIRLYGLSFSTTLPTGTAWSGEISYRPNAPVQLNSTDILFAGVRPLGGALS CEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCEEECCCCEEEECCCCCCCCCC NASLLTGVPGQDLHGYRRKEITQFQTTLTHFFDQVMGASRLTLVGEVGVTHVGGLESTSD CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCC VRYGRDPVYGPGELPATGGANTCANILNASTINGAGPGSPQNNRSRNCTDEGFTTSTSWG CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YRGRAIWEYNDVFAGVNLKPNVAWSHDVSGYSPGPGGNFEEGRKAVSLGVDAEYQNTYTA CCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCEEEE SLAYTNFFDGKYTTVDDRDFVALSFGVNF EEEEEEECCCEEEEECCCCEEEEEECCCC >Mature Secondary Structure TSVNQFWRRAKLPLAVSLASSLAGPAFGVSFNVGEIEGQFDSSLSIGASWSTQSPNKNL CCHHHHHHHHCCCEEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCE IGVNNGGHGLSQTSDDGHANFKSGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKD EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEEECC ESREFKDISDSNRKEGAKSAGGQILDAFVYHNYAIADQPGSVRLGKQVVSWGESTFIGGG CCCHHHCCCCCCHHCCHHHCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCEEECCC INSINPIDVSAFRRPGAEIKEGLIPVNMFYVSQSLTDNLSAEAFYQLEWDQTVVDNCGTF CCCCCCCCHHHHCCCCHHHHHCCCEEEEEEEEHHHHCCCCCEEEEEEECCHHHHHHHHHH FSQPDIIADGCDSNLRVLNKRSTIPAIALGPLAANGVDVNQEGVLVRRGGDRDARDSGQW CCCCCEEECCCCCCEEEEECCCCCCEEEECCEECCCCCCCCCCEEEEECCCCCCCCCCCC GASFKYMFDPLDTEFGAYFMNYHSRAPIFSATGAPQSVYNTARGLPGPFAALAPLLVAGN CCEEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHEEECC SQYFVEYPEDIRLYGLSFSTTLPTGTAWSGEISYRPNAPVQLNSTDILFAGVRPLGGALS CEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCEEECCCCEEEECCCCCCCCCC NASLLTGVPGQDLHGYRRKEITQFQTTLTHFFDQVMGASRLTLVGEVGVTHVGGLESTSD CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCC VRYGRDPVYGPGELPATGGANTCANILNASTINGAGPGSPQNNRSRNCTDEGFTTSTSWG CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YRGRAIWEYNDVFAGVNLKPNVAWSHDVSGYSPGPGGNFEEGRKAVSLGVDAEYQNTYTA CCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCEEEE SLAYTNFFDGKYTTVDDRDFVALSFGVNF EEEEEEECCCEEEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA