| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460928
Identifier: 77460928
GI number: 77460928
Start: 5313456
End: 5314820
Strand: Reverse
Name: 77460928
Synonym: Pfl01_4707
Alternate gene names: NA
Gene position: 5314820-5313456 (Counterclockwise)
Preceding gene: 77460929
Following gene: 77460927
Centisome position: 82.55
GC content: 61.1
Gene sequence:
>1365_bases ATGAAAATAACAAAGAGTCTGTTCCACGCCGGTGTTCTGGGCCTGTCGCTGCTGGCGACCGGTGTCATGGCGGCGGTGCC TGCCGCCGAAGCGGACAAACTGGGCAAGAGCCTGACCCCGATGGGCGCCGAAATGGCCGGCAACGCCGACGGCTCGATCC CGGCCTGGAAACCGATGCCGAAGAATGCCGGCACCGTCGACAGCAAAGGCTTCCTGTCAGACCCGTATGCCAGCGAAAAA CCGCTGTTCACCATCACCAAGCAGAACGTCGATCAGTACAAGGCCAAGCTCGCGCCGGGTCAGTACGCGATGTTCCAGCG CTACCCTGACACCTTCAAGATGCCGGTCTACCCGTCCCATCGCGGCGCCACCGTGCCGGATGAGGTATTCGCCGCCATCA AGAAGAACGCCACCACCACGACCCTGGTGTCGGGTGGCAACGGTCTGGAAAACTTCGATACCGCCGTGCCGTTCCCGATT CCGAAAACCGGCGTGGAAGTCATCTGGAACCACATCACCCGCTATCGCGGCGGCAGCGTGACCCGTCTGGTGACCCAGGC CACGCCGCAACCGAACGGCTCGTTCAGCCTGGTGTACTTCCAGGACCAGTTCGTGTTCCGCGACAAGATGAAGGATTACG ATCCGGCGAACCCGGGCAACATCCTGTTCTACTTCAAGCAGAAAGTGACCGCGCCGGCACGTCTGGCCGGTGGCGTGCTG CTGGTGCACGAAACCCTCGACCAGGTGAAGGAACCGCGTTCGGCGTGGGTCTACAACGCCGGTCAGCGTCGTGTGCGCCG CGCACCACAAGTGTCCTATGACGGCCCGGGTACTGCGGCGGACGGGCTGCGTACCTCCGACAACCTGGACATGTTCAACG GTGCGCCGGACCGTTACGACTGGAAACTGGTCGGCAAGCAAGAGATGTACATCGCCTCCGACAGCTACAAGCTCGACGAT CCGAAACTCAAGTACACCGACATCATCAAGGCCGGGCACATCAACCAGGATCTGGCGCGTTATGAACTGCGTCGCGTCTG GCATGTGACCGCGACGCTGAAGGAAGGTCAGCGCCACATCTACGCCAAGCGTGACTTCTTCATCGACGAGGACACCTGGC AAGCGGCGGTGATCGATCACTACGATGGTCGCAACCAACTGTGGCGCGTGGCGGAAGCCCACTCCCAGAACTACTACAAC GTGCAGGTGCCTTGGTACACCCTGGAAACCCTCTACGATCTGCAATCCGGTCGCTATCTGGCGCTGGGCATGAAGAACGA AGAGAAGTCGGCGTATGACTTCGGCTTCACTGCCACCACCAGCGACTTCACCCCGGCCGCCCTGCGTCAGGATGGTGTTC GCTAA
Upstream 100 bases:
>100_bases CTTCTTCGACGGCAAGTACACCACCGTGGATGACCGCGACTTCGTGGCGCTCAGCTTCGGCGTGAACTTCTAAGCACTGC ATTTCAGGACGAACGAATTT
Downstream 100 bases:
>100_bases GCTCCTGTAAATCGAGGCCGCATCCTCGTGAAAACGCCCCGACAGGTTCGGGGCGTTTTTTGTCTGTCGCTTTTTTCGTA GCCTTTTTGTAGCCATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKITKSLFHAGVLGLSLLATGVMAAVPAAEADKLGKSLTPMGAEMAGNADGSIPAWKPMPKNAGTVDSKGFLSDPYASEK PLFTITKQNVDQYKAKLAPGQYAMFQRYPDTFKMPVYPSHRGATVPDEVFAAIKKNATTTTLVSGGNGLENFDTAVPFPI PKTGVEVIWNHITRYRGGSVTRLVTQATPQPNGSFSLVYFQDQFVFRDKMKDYDPANPGNILFYFKQKVTAPARLAGGVL LVHETLDQVKEPRSAWVYNAGQRRVRRAPQVSYDGPGTAADGLRTSDNLDMFNGAPDRYDWKLVGKQEMYIASDSYKLDD PKLKYTDIIKAGHINQDLARYELRRVWHVTATLKEGQRHIYAKRDFFIDEDTWQAAVIDHYDGRNQLWRVAEAHSQNYYN VQVPWYTLETLYDLQSGRYLALGMKNEEKSAYDFGFTATTSDFTPAALRQDGVR
Sequences:
>Translated_454_residues MKITKSLFHAGVLGLSLLATGVMAAVPAAEADKLGKSLTPMGAEMAGNADGSIPAWKPMPKNAGTVDSKGFLSDPYASEK PLFTITKQNVDQYKAKLAPGQYAMFQRYPDTFKMPVYPSHRGATVPDEVFAAIKKNATTTTLVSGGNGLENFDTAVPFPI PKTGVEVIWNHITRYRGGSVTRLVTQATPQPNGSFSLVYFQDQFVFRDKMKDYDPANPGNILFYFKQKVTAPARLAGGVL LVHETLDQVKEPRSAWVYNAGQRRVRRAPQVSYDGPGTAADGLRTSDNLDMFNGAPDRYDWKLVGKQEMYIASDSYKLDD PKLKYTDIIKAGHINQDLARYELRRVWHVTATLKEGQRHIYAKRDFFIDEDTWQAAVIDHYDGRNQLWRVAEAHSQNYYN VQVPWYTLETLYDLQSGRYLALGMKNEEKSAYDFGFTATTSDFTPAALRQDGVR >Mature_454_residues MKITKSLFHAGVLGLSLLATGVMAAVPAAEADKLGKSLTPMGAEMAGNADGSIPAWKPMPKNAGTVDSKGFLSDPYASEK PLFTITKQNVDQYKAKLAPGQYAMFQRYPDTFKMPVYPSHRGATVPDEVFAAIKKNATTTTLVSGGNGLENFDTAVPFPI PKTGVEVIWNHITRYRGGSVTRLVTQATPQPNGSFSLVYFQDQFVFRDKMKDYDPANPGNILFYFKQKVTAPARLAGGVL LVHETLDQVKEPRSAWVYNAGQRRVRRAPQVSYDGPGTAADGLRTSDNLDMFNGAPDRYDWKLVGKQEMYIASDSYKLDD PKLKYTDIIKAGHINQDLARYELRRVWHVTATLKEGQRHIYAKRDFFIDEDTWQAAVIDHYDGRNQLWRVAEAHSQNYYN VQVPWYTLETLYDLQSGRYLALGMKNEEKSAYDFGFTATTSDFTPAALRQDGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010752 [H]
Pfam domain/function: PF07044 DUF1329 [H]
EC number: NA
Molecular weight: Translated: 50761; Mature: 50761
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITKSLFHAGVLGLSLLATGVMAAVPAAEADKLGKSLTPMGAEMAGNADGSIPAWKPMP CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC KNAGTVDSKGFLSDPYASEKPLFTITKQNVDQYKAKLAPGQYAMFQRYPDTFKMPVYPSH CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC RGATVPDEVFAAIKKNATTTTLVSGGNGLENFDTAVPFPIPKTGVEVIWNHITRYRGGSV CCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE TRLVTQATPQPNGSFSLVYFQDQFVFRDKMKDYDPANPGNILFYFKQKVTAPARLAGGVL EEEEEECCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCEE LVHETLDQVKEPRSAWVYNAGQRRVRRAPQVSYDGPGTAADGLRTSDNLDMFNGAPDRYD EEHHHHHHHHCCHHHEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE WKLVGKQEMYIASDSYKLDDPKLKYTDIIKAGHINQDLARYELRRVWHVTATLKEGQRHI EEEECCCEEEEECCCEECCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE YAKRDFFIDEDTWQAAVIDHYDGRNQLWRVAEAHSQNYYNVQVPWYTLETLYDLQSGRYL EEECCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCEEHHHHHHHCCCCEE ALGMKNEEKSAYDFGFTATTSDFTPAALRQDGVR EEECCCCCCCCEECCEEECCCCCCHHHHHHCCCC >Mature Secondary Structure MKITKSLFHAGVLGLSLLATGVMAAVPAAEADKLGKSLTPMGAEMAGNADGSIPAWKPMP CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC KNAGTVDSKGFLSDPYASEKPLFTITKQNVDQYKAKLAPGQYAMFQRYPDTFKMPVYPSH CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC RGATVPDEVFAAIKKNATTTTLVSGGNGLENFDTAVPFPIPKTGVEVIWNHITRYRGGSV CCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE TRLVTQATPQPNGSFSLVYFQDQFVFRDKMKDYDPANPGNILFYFKQKVTAPARLAGGVL EEEEEECCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCEE LVHETLDQVKEPRSAWVYNAGQRRVRRAPQVSYDGPGTAADGLRTSDNLDMFNGAPDRYD EEHHHHHHHHCCHHHEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE WKLVGKQEMYIASDSYKLDDPKLKYTDIIKAGHINQDLARYELRRVWHVTATLKEGQRHI EEEECCCEEEEECCCEECCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE YAKRDFFIDEDTWQAAVIDHYDGRNQLWRVAEAHSQNYYNVQVPWYTLETLYDLQSGRYL EEECCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCEEHHHHHHHCCCCEE ALGMKNEEKSAYDFGFTATTSDFTPAALRQDGVR EEECCCCCCCCEECCEEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]