| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460872
Identifier: 77460872
GI number: 77460872
Start: 5248674
End: 5249234
Strand: Reverse
Name: 77460872
Synonym: Pfl01_4651
Alternate gene names: NA
Gene position: 5249234-5248674 (Counterclockwise)
Preceding gene: 77460873
Following gene: 77460871
Centisome position: 81.53
GC content: 63.1
Gene sequence:
>561_bases ATGTCGCACTTCGCCTCTTCCCGTCGTTTCAGCCTGGCCACTTTGGGCCTGTCGGTTGCCTTGCTGTCCAGTCCGTTCGC GTTCGCCGAATCCGCCTTGATCGAACCCCAGACCCTGATCGTCGATCAGAGCCTGCCCAAGGCGCAGCGAGATGCAATGG AACTGGCGGCGCGGCGTTACGGCAGTTTCTGGAACACGGGCGAAGAGGCGCTGGCCACCGCCGCCCTGTCGCCGCAGTTC GTCGACAAGACCCCGCCGGAAGGCCGGGTGCAGGGGCCGACCGGGCCGCTGCTGGCGTCCAAGTTCTTTCGTACGGCGGT GCCGGACTTGAGTTGCGAGATCGAGCAAATGATCGTCGCCGGGGATCGCGTGGTGGTGCATCTGCACTTTCGCGGGCATT TCACCGGCACGTTCAAGGCTCTCAAAGGGCAGGGCCAGCGTGTAGACTTCCGGGCAACCGATATCTATCAGATCGACAAC GGTCGCATCGCGGCCAATTGGCATATCGAAGACAACATCAGCCTGATGGCGCAACTGCAAGCGCAGCCGCCGGCCAGCTG A
Upstream 100 bases:
>100_bases AAATTCTGTTTAAAGGTTAATCGTTTCTTAACCGGTTTATCGTTTATTCCCCGATGCTGATGATAGGCGCTCGTTCGTTT ACATGATCAGGATCGCCCCC
Downstream 100 bases:
>100_bases ACCATGGACATGAAAGGGAAACGCGATGAGCGAGGAAACGATTCGATTGGGACGTGAGCGGCGCTATCTGGTGTTGCTGG GCATCATCTGCCTGGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSHFASSRRFSLATLGLSVALLSSPFAFAESALIEPQTLIVDQSLPKAQRDAMELAARRYGSFWNTGEEALATAALSPQF VDKTPPEGRVQGPTGPLLASKFFRTAVPDLSCEIEQMIVAGDRVVVHLHFRGHFTGTFKALKGQGQRVDFRATDIYQIDN GRIAANWHIEDNISLMAQLQAQPPAS
Sequences:
>Translated_186_residues MSHFASSRRFSLATLGLSVALLSSPFAFAESALIEPQTLIVDQSLPKAQRDAMELAARRYGSFWNTGEEALATAALSPQF VDKTPPEGRVQGPTGPLLASKFFRTAVPDLSCEIEQMIVAGDRVVVHLHFRGHFTGTFKALKGQGQRVDFRATDIYQIDN GRIAANWHIEDNISLMAQLQAQPPAS >Mature_185_residues SHFASSRRFSLATLGLSVALLSSPFAFAESALIEPQTLIVDQSLPKAQRDAMELAARRYGSFWNTGEEALATAALSPQFV DKTPPEGRVQGPTGPLLASKFFRTAVPDLSCEIEQMIVAGDRVVVHLHFRGHFTGTFKALKGQGQRVDFRATDIYQIDNG RIAANWHIEDNISLMAQLQAQPPAS
Specific function: Unknown
COG id: COG5485
COG function: function code R; Predicted ester cyclase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20326; Mature: 20195
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFASSRRFSLATLGLSVALLSSPFAFAESALIEPQTLIVDQSLPKAQRDAMELAARRY CCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH GSFWNTGEEALATAALSPQFVDKTPPEGRVQGPTGPLLASKFFRTAVPDLSCEIEQMIVA CCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHHEEE GDRVVVHLHFRGHFTGTFKALKGQGQRVDFRATDIYQIDNGRIAANWHIEDNISLMAQLQ CCEEEEEEEECCCCEEEHHHHCCCCCEEEEEECEEEEECCCEEEEEEEECCCCEEEEEEC AQPPAS CCCCCC >Mature Secondary Structure SHFASSRRFSLATLGLSVALLSSPFAFAESALIEPQTLIVDQSLPKAQRDAMELAARRY CCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH GSFWNTGEEALATAALSPQFVDKTPPEGRVQGPTGPLLASKFFRTAVPDLSCEIEQMIVA CCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHHEEE GDRVVVHLHFRGHFTGTFKALKGQGQRVDFRATDIYQIDNGRIAANWHIEDNISLMAQLQ CCEEEEEEEECCCCEEEHHHHCCCCCEEEEEECEEEEECCCEEEEEEEECCCCEEEEEEC AQPPAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA