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The map label for this gene is yoeB [H]

Identifier: 77460856

GI number: 77460856

Start: 5234505

End: 5234759

Strand: Direct

Name: yoeB [H]

Synonym: Pfl01_4635

Alternate gene names: 77460856

Gene position: 5234505-5234759 (Clockwise)

Preceding gene: 77460855

Following gene: 77460858

Centisome position: 81.3

GC content: 50.2

Gene sequence:

>255_bases
ATGAAAATCCAGTTCACGCCAACGGGCTGGGAAGACTACTTATGGTTTCAACAAAACGATAAGGCCGGTCTCAAACGAAT
CAATCTTTTGATCAAAGCGATCCAGCGCCAACCCTTTGAAGGCTTGGGCAAACCGGAGCCGCTCAAGCACAACATGAGCG
GCTTCTGGTCACGGCGGATAACTGCCGAGCATCGCTTGGTCTATGCGATCGTAGACGGCGAAATCTGCGTCATAACTTGC
AGATTTCACTACTGA

Upstream 100 bases:

>100_bases
CGGCTTATCTGCTGCGTTCTCCGGCCAATGCCGAGCGCTTGATCAAATCAATTGGCGAAATGCGCGCTGGAAAAGCCAAA
GTCAGGCAACTGATTGAAGA

Downstream 100 bases:

>100_bases
CCGAGGGATGAGACATGGCTCAGGGAACGGCCAACACCTCTGACAATCATCCCCACCTCCCGCTCATCAATCGTCAGCGG
CGGCAGCAGCCGGATCGTCT

Product: addiction module toxin, Txe/YoeB

Products: NA

Alternate protein names: Endoribonuclease YoeB; Putative mRNA interferase YoeB [H]

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKIQFTPTGWEDYLWFQQNDKAGLKRINLLIKAIQRQPFEGLGKPEPLKHNMSGFWSRRITAEHRLVYAIVDGEICVITC
RFHY

Sequences:

>Translated_84_residues
MKIQFTPTGWEDYLWFQQNDKAGLKRINLLIKAIQRQPFEGLGKPEPLKHNMSGFWSRRITAEHRLVYAIVDGEICVITC
RFHY
>Mature_84_residues
MKIQFTPTGWEDYLWFQQNDKAGLKRINLLIKAIQRQPFEGLGKPEPLKHNMSGFWSRRITAEHRLVYAIVDGEICVITC
RFHY

Specific function: Part of a toxin-antitoxin (TA) module. Has RNase activity and preferentially cleaves at the 3'-end of purine ribonucleotides [H]

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YoeB family [H]

Homologues:

Organism=Escherichia coli, GI87082025, Length=84, Percent_Identity=59.5238095238095, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9951; Mature: 9951

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQFTPTGWEDYLWFQQNDKAGLKRINLLIKAIQRQPFEGLGKPEPLKHNMSGFWSRRI
CEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
TAEHRLVYAIVDGEICVITCRFHY
CCCCEEEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKIQFTPTGWEDYLWFQQNDKAGLKRINLLIKAIQRQPFEGLGKPEPLKHNMSGFWSRRI
CEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
TAEHRLVYAIVDGEICVITCRFHY
CCCCEEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]