| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460847
Identifier: 77460847
GI number: 77460847
Start: 5227031
End: 5227672
Strand: Direct
Name: 77460847
Synonym: Pfl01_4626
Alternate gene names: NA
Gene position: 5227031-5227672 (Clockwise)
Preceding gene: 77460846
Following gene: 77460848
Centisome position: 81.19
GC content: 42.21
Gene sequence:
>642_bases ATGGAAAAGAATGTTGTGCTATACATTGACGAGGAGCAAATCGCTCTAGACTCTTACGGCCGAGAACTAAGAAAAAATTT ACCTCCAGAATTAGAGATCATTTGTACTCTACCAGAGCCCACACTTCCTTTAATGCTGAAATTTATTTGCAGTATGCGCC CTCGTATTGCTTCCATCGTTGTCGATGAGCACCTTGAGGTCGCAGGAACTGCTGATTATATCGGAAGCCAATTAGCGGAC GCATACAGGCAACTGGACAGCAAAATTCCTATATATATTCTCAGCAATCACCCAGATGAAATAGATGATAATCTAGAAAG TGTTGAGTACATATTAAGCAAGGATGACTTTGCTGATGGAGGCCCAGCGCTTGAAAGCGCCATCACACGTATGGTTCGCC ACATCAATGCTTACGAACAAATCGTCGATGAGCGCGAACAACGATTTGTCCTCCTATTAAAAAAATATGTTTTATCTGAA ATTTCAACAGAGGAAGCAAAAGAGCTAAACGAGTTGAAATTCTGGCGAGAAGCTCCCGCGGCCATCGAGGAGTCGACTAT GACCCTGGAGCTCAAGAGAAAACTAGACGAGCAGGAAGACATACTAAATAACATAGAACAGATACTTTCAGGTAAAAAAT AG
Upstream 100 bases:
>100_bases CATACAGGTGGGAATATTTCCGCAATATCAAAAGGAAGACTTGGCGGCGCAGAGTTTTTAATCAATATACCATTGAACAC AAACAACAAGGCCTGACTTC
Downstream 100 bases:
>100_bases ATGTTCTACCCTATACTCACTCGTCGATCTGTTTACTCAAAAAAAAATGACGGCAATTATTACGCAGATTACCACCATTA CTTCACAGAAATAAAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MEKNVVLYIDEEQIALDSYGRELRKNLPPELEIICTLPEPTLPLMLKFICSMRPRIASIVVDEHLEVAGTADYIGSQLAD AYRQLDSKIPIYILSNHPDEIDDNLESVEYILSKDDFADGGPALESAITRMVRHINAYEQIVDEREQRFVLLLKKYVLSE ISTEEAKELNELKFWREAPAAIEESTMTLELKRKLDEQEDILNNIEQILSGKK
Sequences:
>Translated_213_residues MEKNVVLYIDEEQIALDSYGRELRKNLPPELEIICTLPEPTLPLMLKFICSMRPRIASIVVDEHLEVAGTADYIGSQLAD AYRQLDSKIPIYILSNHPDEIDDNLESVEYILSKDDFADGGPALESAITRMVRHINAYEQIVDEREQRFVLLLKKYVLSE ISTEEAKELNELKFWREAPAAIEESTMTLELKRKLDEQEDILNNIEQILSGKK >Mature_213_residues MEKNVVLYIDEEQIALDSYGRELRKNLPPELEIICTLPEPTLPLMLKFICSMRPRIASIVVDEHLEVAGTADYIGSQLAD AYRQLDSKIPIYILSNHPDEIDDNLESVEYILSKDDFADGGPALESAITRMVRHINAYEQIVDEREQRFVLLLKKYVLSE ISTEEAKELNELKFWREAPAAIEESTMTLELKRKLDEQEDILNNIEQILSGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24479; Mature: 24479
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNVVLYIDEEQIALDSYGRELRKNLPPELEIICTLPEPTLPLMLKFICSMRPRIASIV CCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHH VDEHLEVAGTADYIGSQLADAYRQLDSKIPIYILSNHPDEIDDNLESVEYILSKDDFADG HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC GPALESAITRMVRHINAYEQIVDEREQRFVLLLKKYVLSEISTEEAKELNELKFWREAPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH AIEESTMTLELKRKLDEQEDILNNIEQILSGKK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEKNVVLYIDEEQIALDSYGRELRKNLPPELEIICTLPEPTLPLMLKFICSMRPRIASIV CCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHH VDEHLEVAGTADYIGSQLADAYRQLDSKIPIYILSNHPDEIDDNLESVEYILSKDDFADG HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC GPALESAITRMVRHINAYEQIVDEREQRFVLLLKKYVLSEISTEEAKELNELKFWREAPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH AIEESTMTLELKRKLDEQEDILNNIEQILSGKK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA